Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN1P18031 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 U91328.1-201ENST00000437528 223 ntBASIC16.4■□□□□ 0.22
PTPN1P18031 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 AC093433.1-201ENST00000458048 571 ntBASIC16.4■□□□□ 0.22
PTPN1P18031 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 MIR5189-201ENST00000577370 114 ntBASIC16.4■□□□□ 0.22
PTPN1P18031 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.4■□□□□ 0.22
PTPN1P18031 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN1P18031 AC015936.2-201ENST00000593177 259 ntBASIC16.4■□□□□ 0.22
PTPN1P18031 AC008735.3-201ENST00000596646 500 ntBASIC16.4■□□□□ 0.22
PTPN1P18031 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN1P18031 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.4■□□□□ 0.22
PTPN1P18031 AL645728.2-202ENST00000641679 227 ntBASIC16.4■□□□□ 0.22
PTPN1P18031 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.4■□□□□ 0.22
PTPN1P18031 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN1P18031 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN1P18031 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN1P18031 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PTPN1P18031 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PTPN1P18031 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PTPN1P18031 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN1P18031 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.39■□□□□ 0.21
PTPN1P18031 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 AC009486.1-201ENST00000569860 813 ntBASIC16.39■□□□□ 0.21
PTPN1P18031 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 FER1L4-210ENST00000615531 5998 ntBASIC16.39■□□□□ 0.21
PTPN1P18031 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.39■□□□□ 0.21
PTPN1P18031 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PTPN1P18031 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PTPN1P18031 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTPN1P18031 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN1P18031 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PTPN1P18031 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN1P18031 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN1P18031 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PTPN1P18031 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms