Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3P10147 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CCL3P10147 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 RNU1-114P-201ENST00000365297 166 ntBASIC14.08□□□□□ -0.16
CCL3P10147 MIR658-201ENST00000385210 100 ntBASIC14.08□□□□□ -0.16
CCL3P10147 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CCL3P10147 AC092933.1-201ENST00000393644 945 ntBASIC14.08□□□□□ -0.16
CCL3P10147 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL3P10147 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3P10147 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 AC004066.1-201ENST00000502488 802 ntBASIC14.08□□□□□ -0.16
CCL3P10147 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.08□□□□□ -0.16
CCL3P10147 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL3P10147 AL359881.2-201ENST00000602973 570 ntBASIC14.08□□□□□ -0.16
CCL3P10147 MIR6805-201ENST00000615055 62 ntBASIC14.08□□□□□ -0.16
CCL3P10147 AP005019.2-201ENST00000615104 511 ntBASIC14.08□□□□□ -0.16
CCL3P10147 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CCL3P10147 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3P10147 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3P10147 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL3P10147 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 AC093525.8-201ENST00000624099 1342 ntBASIC14.08□□□□□ -0.16
CCL3P10147 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL3P10147 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL3P10147 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3P10147 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 PDIA3P1-201ENST00000471856 1510 ntBASIC14.07□□□□□ -0.16
CCL3P10147 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3P10147 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 ANKRD19P-201ENST00000338192 862 ntBASIC14.07□□□□□ -0.16
CCL3P10147 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL3P10147 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.07□□□□□ -0.16
CCL3P10147 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 BOLA2P3-201ENST00000404566 256 ntBASIC14.07□□□□□ -0.16
CCL3P10147 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL3P10147 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL3P10147 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CCL3P10147 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCL3P10147 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3P10147 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.07□□□□□ -0.16
CCL3P10147 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 AC007787.1-201ENST00000588095 1583 ntBASIC14.07□□□□□ -0.16
CCL3P10147 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCL3P10147 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 AC087481.3-201ENST00000602886 1894 ntBASIC14.07□□□□□ -0.16
CCL3P10147 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL3P10147 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 CICP11-201ENST00000434745 2827 ntBASIC14.07□□□□□ -0.16
CCL3P10147 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL3P10147 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
CCL3P10147 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL3P10147 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3P10147 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL3P10147 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3P10147 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL3P10147 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3P10147 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms