Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 AL161772.1-201ENST00000610494 4412 ntBASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
CCNYL3P0C7X3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CLK3P2-201ENST00000427566 1453 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 ELK1P1-201ENST00000485699 580 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 HILS1-202ENST00000545329 423 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 RAB43P1-201ENST00000561790 589 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AC106886.1-201ENST00000568660 600 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CTBP2P3-201ENST00000585629 1255 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 PRAL-201ENST00000624952 3286 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 KRT8P37-201ENST00000451609 1420 ntBASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.09■□□□□ 0.01
CCNYL3P0C7X3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
CCNYL3P0C7X3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL3P0C7X3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.08■□□□□ 0.01
CCNYL3P0C7X3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.08■□□□□ 0.01
CCNYL3P0C7X3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CCNYL3P0C7X3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCNYL3P0C7X3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 HIST3H2BA-201ENST00000436555 524 ntBASIC15.08■□□□□ 0
CCNYL3P0C7X3 AC007274.1-201ENST00000439805 662 ntBASIC15.08■□□□□ 0
CCNYL3P0C7X3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 AC007389.4-201ENST00000454674 793 ntBASIC15.08■□□□□ 0
CCNYL3P0C7X3 RN7SL837P-201ENST00000463010 287 ntBASIC15.08■□□□□ 0
CCNYL3P0C7X3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 KRT17P8-201ENST00000540749 863 ntBASIC15.08■□□□□ 0
CCNYL3P0C7X3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCNYL3P0C7X3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.08■□□□□ 0
CCNYL3P0C7X3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms