Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 AC091951.1-201ENST00000512854 2465 ntBASIC14.08□□□□□ -0.16
FREM3P0C091 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FREM3P0C091 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 RAB43P1-201ENST00000561790 589 ntBASIC14.08□□□□□ -0.16
FREM3P0C091 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.08□□□□□ -0.16
FREM3P0C091 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.08□□□□□ -0.16
FREM3P0C091 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
FREM3P0C091 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 CROCCP1-201ENST00000426910 5675 ntBASIC14.07□□□□□ -0.16
FREM3P0C091 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.07□□□□□ -0.16
FREM3P0C091 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.07□□□□□ -0.16
FREM3P0C091 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FREM3P0C091 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 AP005482.1-201ENST00000563722 1273 ntBASIC14.07□□□□□ -0.16
FREM3P0C091 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.07□□□□□ -0.16
FREM3P0C091 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.07□□□□□ -0.16
FREM3P0C091 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.07□□□□□ -0.16
FREM3P0C091 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.07□□□□□ -0.16
FREM3P0C091 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.07□□□□□ -0.16
FREM3P0C091 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 AC020658.6-201ENST00000623564 1870 ntBASIC14.07□□□□□ -0.16
FREM3P0C091 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.07□□□□□ -0.16
FREM3P0C091 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
FREM3P0C091 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FREM3P0C091 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
FREM3P0C091 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 AC012441.1-201ENST00000446669 685 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 AC068587.3-201ENST00000526613 355 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.06□□□□□ -0.16
FREM3P0C091 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.06□□□□□ -0.16
FREM3P0C091 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.06□□□□□ -0.16
FREM3P0C091 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 AC138035.3-201ENST00000622706 2791 ntBASIC14.06□□□□□ -0.16
FREM3P0C091 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FREM3P0C091 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
FREM3P0C091 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.06□□□□□ -0.16
FREM3P0C091 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms