Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT6AP02538 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.11■□□□□ 0.01
KRT6AP02538 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 AL512356.2-201ENST00000546955 174 ntBASIC15.11■□□□□ 0.01
KRT6AP02538 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT6AP02538 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 AGAP7P-201ENST00000582299 2062 ntBASIC15.11■□□□□ 0.01
KRT6AP02538 AGAP14-201ENST00000624701 2060 ntBASIC15.11■□□□□ 0.01
KRT6AP02538 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT6AP02538 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.11■□□□□ 0.01
KRT6AP02538 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.11■□□□□ 0.01
KRT6AP02538 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KRT6AP02538 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT6AP02538 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.11■□□□□ 0.01
KRT6AP02538 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT6AP02538 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6AP02538 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT6AP02538 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6AP02538 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 CNN2P11-201ENST00000429351 262 ntBASIC15.1■□□□□ 0.01
KRT6AP02538 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6AP02538 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 AC092865.5-201ENST00000545435 363 ntBASIC15.1■□□□□ 0.01
KRT6AP02538 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT6AP02538 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
KRT6AP02538 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6AP02538 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.1■□□□□ 0.01
KRT6AP02538 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6AP02538 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT6AP02538 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRT6AP02538 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT6AP02538 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6AP02538 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms