Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CXCL13O43927 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL13O43927 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 AC026410.3-201ENST00000514280 936 ntBASIC13.89□□□□□ -0.19
CXCL13O43927 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.89□□□□□ -0.19
CXCL13O43927 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 AC124283.3-201ENST00000570869 594 ntBASIC13.89□□□□□ -0.19
CXCL13O43927 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCL13O43927 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CXCL13O43927 CU634019.7-201ENST00000624153 1185 ntBASIC13.89□□□□□ -0.19
CXCL13O43927 FP236241.2-201ENST00000624906 1185 ntBASIC13.89□□□□□ -0.19
CXCL13O43927 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL13O43927 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CXCL13O43927 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
CXCL13O43927 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL13O43927 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CXCL13O43927 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
CXCL13O43927 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 AL162726.2-201ENST00000438986 1017 ntBASIC13.88□□□□□ -0.19
CXCL13O43927 RN7SL837P-201ENST00000463010 287 ntBASIC13.88□□□□□ -0.19
CXCL13O43927 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.88□□□□□ -0.19
CXCL13O43927 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.88□□□□□ -0.19
CXCL13O43927 AC132938.2-201ENST00000579188 680 ntBASIC13.88□□□□□ -0.19
CXCL13O43927 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 AL591163.1-201ENST00000641757 987 ntBASIC13.88□□□□□ -0.19
CXCL13O43927 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 AC136621.1-201ENST00000624017 2304 ntBASIC13.88□□□□□ -0.19
CXCL13O43927 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CXCL13O43927 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CXCL13O43927 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL13O43927 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CXCL13O43927 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL13O43927 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL13O43927 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms