Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.21□□□□□ -0.14
RNF13O43567 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF13O43567 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.2□□□□□ -0.14
RNF13O43567 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RNF13O43567 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 AC009090.5-201ENST00000624886 2285 ntBASIC14.2□□□□□ -0.14
RNF13O43567 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF13O43567 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.2□□□□□ -0.14
RNF13O43567 FO393414.2-201ENST00000405153 598 ntBASIC14.2□□□□□ -0.14
RNF13O43567 MIR1233-2-201ENST00000408138 82 ntBASIC14.2□□□□□ -0.14
RNF13O43567 MIR1233-1-201ENST00000408722 82 ntBASIC14.2□□□□□ -0.14
RNF13O43567 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF13O43567 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 HNRNPUP1-201ENST00000554987 333 ntBASIC14.2□□□□□ -0.14
RNF13O43567 LINC00628-201ENST00000628516 1289 ntBASIC14.2□□□□□ -0.14
RNF13O43567 AC079781.4-201ENST00000641908 219 ntBASIC14.2□□□□□ -0.14
RNF13O43567 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF13O43567 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF13O43567 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF13O43567 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF13O43567 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RNF13O43567 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 SPDYE17-201ENST00000412399 783 ntBASIC14.19□□□□□ -0.14
RNF13O43567 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RNF13O43567 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF13O43567 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
RNF13O43567 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
RNF13O43567 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF13O43567 AL589739.1-201ENST00000607720 493 ntBASIC14.19□□□□□ -0.14
RNF13O43567 AL133215.2-201ENST00000609242 977 ntBASIC14.19□□□□□ -0.14
RNF13O43567 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 AC232323.1-201ENST00000540724 2099 ntBASIC14.19□□□□□ -0.14
RNF13O43567 REXO1L5P-201ENST00000622260 2098 ntBASIC14.19□□□□□ -0.14
RNF13O43567 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 KRT8P44-201ENST00000441609 1350 ntBASIC14.19□□□□□ -0.14
RNF13O43567 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 LINC00528-201ENST00000600723 2160 ntBASIC14.19□□□□□ -0.14
RNF13O43567 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF13O43567 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF13O43567 AL390755.1-201ENST00000623716 2027 ntBASIC14.19□□□□□ -0.14
RNF13O43567 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF13O43567 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms