Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MID1O15344 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.51■□□□□ 0.07
MID1O15344 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.51■□□□□ 0.07
MID1O15344 RNA5SP412-201ENST00000516234 123 ntBASIC15.51■□□□□ 0.07
MID1O15344 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 AC025279.2-201ENST00000569730 653 ntBASIC15.51■□□□□ 0.07
MID1O15344 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.51■□□□□ 0.07
MID1O15344 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.51■□□□□ 0.07
MID1O15344 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
MID1O15344 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MID1O15344 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
MID1O15344 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MID1O15344 RNU1-114P-201ENST00000365297 166 ntBASIC15.5■□□□□ 0.07
MID1O15344 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.5■□□□□ 0.07
MID1O15344 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 MIR1908-201ENST00000410394 80 ntBASIC15.5■□□□□ 0.07
MID1O15344 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.5■□□□□ 0.07
MID1O15344 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.5■□□□□ 0.07
MID1O15344 AC079316.1-201ENST00000548397 411 ntBASIC15.5■□□□□ 0.07
MID1O15344 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.5■□□□□ 0.07
MID1O15344 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.5■□□□□ 0.07
MID1O15344 MIR4538-201ENST00000581377 78 ntBASIC15.5■□□□□ 0.07
MID1O15344 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MID1O15344 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MID1O15344 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
MID1O15344 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MID1O15344 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MID1O15344 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MID1O15344 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 AC084364.1-201ENST00000551967 1556 ntBASIC15.49■□□□□ 0.07
MID1O15344 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.49■□□□□ 0.07
MID1O15344 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.49■□□□□ 0.07
MID1O15344 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MID1O15344 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MID1O15344 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
MID1O15344 CNN2P8-201ENST00000421872 913 ntBASIC15.49■□□□□ 0.07
MID1O15344 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.49■□□□□ 0.07
MID1O15344 FAM197Y7-201ENST00000432892 766 ntBASIC15.49■□□□□ 0.07
MID1O15344 ACTBP11-201ENST00000436287 1126 ntBASIC15.49■□□□□ 0.07
MID1O15344 AL355994.2-201ENST00000447882 704 ntBASIC15.49■□□□□ 0.07
MID1O15344 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.49■□□□□ 0.07
MID1O15344 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MID1O15344 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MID1O15344 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms