Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC018470.1-201ENST00000624790 3129 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC007613.1-201ENST00000572811 2597 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 COX20P1-201ENST00000366529 357 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 DUTP3-201ENST00000450025 415 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 DUX4L47-201ENST00000566374 394 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC139713.2-201ENST00000641328 2723 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC011477.6-201ENST00000604980 1927 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 RNF216P1-203ENST00000404404 2427 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 AC105020.1-201ENST00000435356 2205 ntBASIC17.66■□□□□ 0.42
TMEM88BA6NKF7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 CR383656.3-201ENST00000551315 183 ntBASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 AC027237.1-201ENST00000560942 655 ntBASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 AC015909.3-201ENST00000572855 1794 ntBASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM88BA6NKF7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM88BA6NKF7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM88BA6NKF7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TMEM88BA6NKF7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM88BA6NKF7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM88BA6NKF7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms