Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 GPS2P2-201ENST00000430745 888 ntBASIC16.52■□□□□ 0.24
RCCD1A6NED2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 AC018529.1-201ENST00000613063 361 ntBASIC16.52■□□□□ 0.24
RCCD1A6NED2 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 AC105339.1-204ENST00000636249 355 ntBASIC16.52■□□□□ 0.24
RCCD1A6NED2 AL928921.2-201ENST00000641325 2442 ntBASIC16.52■□□□□ 0.24
RCCD1A6NED2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RCCD1A6NED2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCCD1A6NED2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.52■□□□□ 0.23
RCCD1A6NED2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.52■□□□□ 0.23
RCCD1A6NED2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
RCCD1A6NED2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RCCD1A6NED2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RCCD1A6NED2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 MIR940-201ENST00000401276 94 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 AL353705.2-201ENST00000428243 662 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 HTR5BP-201ENST00000430851 1154 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 ACTG1P14-201ENST00000446382 1122 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 AC055717.3-201ENST00000622967 595 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCCD1A6NED2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 HSPA7-201ENST00000445535 1927 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
RCCD1A6NED2 KRT8P12-202ENST00000472924 1397 ntBASIC16.51■□□□□ 0.23
RCCD1A6NED2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 AC018442.1-201ENST00000421439 2061 ntBASIC16.5■□□□□ 0.23
RCCD1A6NED2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms