Protein–RNA interactions for Protein: Q9NRA1

PDGFC, Platelet-derived growth factor C, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFCQ9NRA1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.29■■□□□ 1.8
PDGFCQ9NRA1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.29■■□□□ 1.8
PDGFCQ9NRA1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFCQ9NRA1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFCQ9NRA1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
PDGFCQ9NRA1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFCQ9NRA1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFCQ9NRA1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDGFCQ9NRA1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDGFCQ9NRA1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDGFCQ9NRA1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PDGFCQ9NRA1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
PDGFCQ9NRA1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFCQ9NRA1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.26■■□□□ 1.79
PDGFCQ9NRA1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.26■■□□□ 1.79
PDGFCQ9NRA1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PDGFCQ9NRA1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PDGFCQ9NRA1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFCQ9NRA1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.25■■□□□ 1.79
PDGFCQ9NRA1 AC133561.4-201ENST00000566112 224 ntBASIC26.25■■□□□ 1.79
PDGFCQ9NRA1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.25■■□□□ 1.79
PDGFCQ9NRA1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFCQ9NRA1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 AC004448.1-201ENST00000458332 883 ntBASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 PBX2P1-201ENST00000493219 1291 ntBASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDGFCQ9NRA1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.23■■□□□ 1.79
PDGFCQ9NRA1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 UNC93B3-201ENST00000308076 687 ntBASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 AC106739.1-201ENST00000617035 715 ntBASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PDGFCQ9NRA1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDGFCQ9NRA1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.21■■□□□ 1.79
PDGFCQ9NRA1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PDGFCQ9NRA1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PDGFCQ9NRA1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PDGFCQ9NRA1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PDGFCQ9NRA1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
PDGFCQ9NRA1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.2■■□□□ 1.78
PDGFCQ9NRA1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 SLC6A10P-202ENST00000431994 2058 ntBASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFCQ9NRA1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFCQ9NRA1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFCQ9NRA1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFCQ9NRA1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PDGFCQ9NRA1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFCQ9NRA1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.18■■□□□ 1.78
PDGFCQ9NRA1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFCQ9NRA1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDGFCQ9NRA1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 AL031432.3-201ENST00000607698 485 ntBASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 AL136162.1-201ENST00000607711 1078 ntBASIC26.15■■□□□ 1.78
PDGFCQ9NRA1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 ZNRF2P3-201ENST00000424200 374 ntBASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 SRD5A1P1-201ENST00000442297 786 ntBASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDGFCQ9NRA1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.14■■□□□ 1.77
PDGFCQ9NRA1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDGFCQ9NRA1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PDGFCQ9NRA1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDGFCQ9NRA1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
PDGFCQ9NRA1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.13■■□□□ 1.77
PDGFCQ9NRA1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms