Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.41■■■□□ 2.14
VPS33BQ9H267 SYT6-210ENST00000641643 1587 ntBASIC28.41■■■□□ 2.14
VPS33BQ9H267 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
VPS33BQ9H267 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
VPS33BQ9H267 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
VPS33BQ9H267 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
VPS33BQ9H267 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.4■■■□□ 2.14
VPS33BQ9H267 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
VPS33BQ9H267 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
VPS33BQ9H267 RASA4CP-201ENST00000424092 1398 ntBASIC28.39■■■□□ 2.14
VPS33BQ9H267 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
VPS33BQ9H267 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
VPS33BQ9H267 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
VPS33BQ9H267 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.39■■■□□ 2.14
VPS33BQ9H267 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
VPS33BQ9H267 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS33BQ9H267 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.38■■■□□ 2.13
VPS33BQ9H267 AC142086.6-201ENST00000621154 1765 ntBASIC28.38■■■□□ 2.13
VPS33BQ9H267 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.38■■■□□ 2.13
VPS33BQ9H267 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.38■■■□□ 2.13
VPS33BQ9H267 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.38■■■□□ 2.13
VPS33BQ9H267 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
VPS33BQ9H267 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
VPS33BQ9H267 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.37■■■□□ 2.13
VPS33BQ9H267 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS33BQ9H267 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS33BQ9H267 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
VPS33BQ9H267 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.37■■■□□ 2.13
VPS33BQ9H267 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
VPS33BQ9H267 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
VPS33BQ9H267 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS33BQ9H267 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
VPS33BQ9H267 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
VPS33BQ9H267 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.36■■■□□ 2.13
VPS33BQ9H267 AL138724.1-201ENST00000606771 1088 ntBASIC28.36■■■□□ 2.13
VPS33BQ9H267 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
VPS33BQ9H267 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.36■■■□□ 2.13
VPS33BQ9H267 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
VPS33BQ9H267 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.35■■■□□ 2.13
VPS33BQ9H267 MIR4767-201ENST00000582827 78 ntBASIC28.35■■■□□ 2.13
VPS33BQ9H267 CA15P2-201ENST00000611168 834 ntBASIC28.35■■■□□ 2.13
VPS33BQ9H267 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
VPS33BQ9H267 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
VPS33BQ9H267 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
VPS33BQ9H267 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
VPS33BQ9H267 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
VPS33BQ9H267 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
VPS33BQ9H267 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.33■■■□□ 2.13
VPS33BQ9H267 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.33■■■□□ 2.13
VPS33BQ9H267 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
VPS33BQ9H267 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
VPS33BQ9H267 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
VPS33BQ9H267 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
VPS33BQ9H267 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.32■■■□□ 2.12
VPS33BQ9H267 AC027682.1-201ENST00000562846 899 ntBASIC28.32■■■□□ 2.12
VPS33BQ9H267 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.32■■■□□ 2.12
VPS33BQ9H267 AC011298.3-201ENST00000615796 283 ntBASIC28.32■■■□□ 2.12
VPS33BQ9H267 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
VPS33BQ9H267 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
VPS33BQ9H267 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
VPS33BQ9H267 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
VPS33BQ9H267 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.31■■■□□ 2.12
VPS33BQ9H267 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
VPS33BQ9H267 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.31■■■□□ 2.12
VPS33BQ9H267 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
VPS33BQ9H267 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.31■■■□□ 2.12
VPS33BQ9H267 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.31■■■□□ 2.12
VPS33BQ9H267 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.31■■■□□ 2.12
VPS33BQ9H267 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
VPS33BQ9H267 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
VPS33BQ9H267 SERBP1P1-201ENST00000396021 1160 ntBASIC28.3■■■□□ 2.12
VPS33BQ9H267 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.3■■■□□ 2.12
VPS33BQ9H267 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.29■■■□□ 2.12
VPS33BQ9H267 AC087623.3-201ENST00000607047 1098 ntBASIC28.29■■■□□ 2.12
VPS33BQ9H267 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.29■■■□□ 2.12
VPS33BQ9H267 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
VPS33BQ9H267 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
VPS33BQ9H267 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
VPS33BQ9H267 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
VPS33BQ9H267 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
VPS33BQ9H267 AC096887.2-201ENST00000623443 1957 ntBASIC28.28■■■□□ 2.12
VPS33BQ9H267 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.28■■■□□ 2.12
VPS33BQ9H267 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
VPS33BQ9H267 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
VPS33BQ9H267 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
VPS33BQ9H267 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.28■■■□□ 2.12
VPS33BQ9H267 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.28■■■□□ 2.12
VPS33BQ9H267 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
VPS33BQ9H267 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
VPS33BQ9H267 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
VPS33BQ9H267 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.27■■■□□ 2.12
VPS33BQ9H267 AL162430.1-201ENST00000480705 870 ntBASIC28.27■■■□□ 2.12
VPS33BQ9H267 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
VPS33BQ9H267 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
VPS33BQ9H267 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
VPS33BQ9H267 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
VPS33BQ9H267 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.26■■■□□ 2.11
VPS33BQ9H267 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
VPS33BQ9H267 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
VPS33BQ9H267 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms