Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00479Q96M42 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00479Q96M42 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00479Q96M42 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00479Q96M42 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00479Q96M42 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00479Q96M42 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 AC126177.7-201ENST00000547904 679 ntBASIC17.68■□□□□ 0.42
LINC00479Q96M42 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00479Q96M42 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00479Q96M42 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00479Q96M42 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00479Q96M42 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00479Q96M42 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00479Q96M42 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00479Q96M42 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LINC00479Q96M42 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00479Q96M42 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
LINC00479Q96M42 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00479Q96M42 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00479Q96M42 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00479Q96M42 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC00479Q96M42 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00479Q96M42 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00479Q96M42 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LINC00479Q96M42 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LINC00479Q96M42 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00479Q96M42 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC00479Q96M42 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC00479Q96M42 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LINC00479Q96M42 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LINC00479Q96M42 AC233723.2-201ENST00000623798 2106 ntBASIC17.65■□□□□ 0.42
LINC00479Q96M42 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LINC00479Q96M42 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LINC00479Q96M42 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00479Q96M42 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC00479Q96M42 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00479Q96M42 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LINC00479Q96M42 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00479Q96M42 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00479Q96M42 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LINC00479Q96M42 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LINC00479Q96M42 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LINC00479Q96M42 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00479Q96M42 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00479Q96M42 LINC00565-201ENST00000562710 2331 ntBASIC17.63■□□□□ 0.41
LINC00479Q96M42 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LINC00479Q96M42 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC00479Q96M42 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00479Q96M42 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC00479Q96M42 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00479Q96M42 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00479Q96M42 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00479Q96M42 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00479Q96M42 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00479Q96M42 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC00479Q96M42 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00479Q96M42 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00479Q96M42 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
LINC00479Q96M42 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00479Q96M42 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LINC00479Q96M42 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00479Q96M42 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms