Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 SNX5-217ENST00000606557 1087 ntBASIC22.15■■□□□ 1.14
ZFHX4Q86UP3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 KRT18P10-201ENST00000388836 1287 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L2-201ENST00000561772 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L6-201ENST00000626483 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L1-201ENST00000627662 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L8-201ENST00000629013 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L3-201ENST00000630187 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L7-201ENST00000630678 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 DUX4L5-201ENST00000630834 1275 ntBASIC22.14■■□□□ 1.14
ZFHX4Q86UP3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZFHX4Q86UP3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZFHX4Q86UP3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFHX4Q86UP3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 SRD5A1P1-201ENST00000442297 786 ntBASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 AC027682.1-201ENST00000562846 899 ntBASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
ZFHX4Q86UP3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 AC093827.2-201ENST00000512654 315 ntBASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.11■■□□□ 1.13
ZFHX4Q86UP3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 TSPY20P-201ENST00000450910 630 ntBASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.1■■□□□ 1.13
ZFHX4Q86UP3 MIR4767-201ENST00000582827 78 ntBASIC22.09■■□□□ 1.13
ZFHX4Q86UP3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.09■■□□□ 1.13
ZFHX4Q86UP3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.09■■□□□ 1.13
ZFHX4Q86UP3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZFHX4Q86UP3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ZFHX4Q86UP3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
ZFHX4Q86UP3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ZFHX4Q86UP3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.08■■□□□ 1.13
ZFHX4Q86UP3 AL499627.2-201ENST00000606283 725 ntBASIC22.08■■□□□ 1.13
ZFHX4Q86UP3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ZFHX4Q86UP3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.08■■□□□ 1.12
ZFHX4Q86UP3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.08■■□□□ 1.12
ZFHX4Q86UP3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ZFHX4Q86UP3 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.07■■□□□ 1.12
ZFHX4Q86UP3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
ZFHX4Q86UP3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.07■■□□□ 1.12
ZFHX4Q86UP3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZFHX4Q86UP3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.06■■□□□ 1.12
ZFHX4Q86UP3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ZFHX4Q86UP3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.05■■□□□ 1.12
ZFHX4Q86UP3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZFHX4Q86UP3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZFHX4Q86UP3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFHX4Q86UP3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZFHX4Q86UP3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ZFHX4Q86UP3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.02■■□□□ 1.12
ZFHX4Q86UP3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZFHX4Q86UP3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.02■■□□□ 1.11
ZFHX4Q86UP3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ZFHX4Q86UP3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ZFHX4Q86UP3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22■■□□□ 1.11
ZFHX4Q86UP3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22■■□□□ 1.11
ZFHX4Q86UP3 AK1-201ENST00000223836 736 ntTSL 3 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms