Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.77■■□□□ 1.56
VARS2Q5ST30 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
VARS2Q5ST30 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
VARS2Q5ST30 MIR6722-201ENST00000617286 78 ntBASIC24.77■■□□□ 1.56
VARS2Q5ST30 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.77■■□□□ 1.56
VARS2Q5ST30 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VARS2Q5ST30 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
VARS2Q5ST30 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
VARS2Q5ST30 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
VARS2Q5ST30 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VARS2Q5ST30 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.76■■□□□ 1.55
VARS2Q5ST30 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
VARS2Q5ST30 AL136116.3-201ENST00000402907 1138 ntBASIC24.76■■□□□ 1.55
VARS2Q5ST30 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.76■■□□□ 1.55
VARS2Q5ST30 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.76■■□□□ 1.55
VARS2Q5ST30 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.76■■□□□ 1.55
VARS2Q5ST30 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
VARS2Q5ST30 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.75■■□□□ 1.55
VARS2Q5ST30 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.75■■□□□ 1.55
VARS2Q5ST30 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.75■■□□□ 1.55
VARS2Q5ST30 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.75■■□□□ 1.55
VARS2Q5ST30 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
VARS2Q5ST30 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
VARS2Q5ST30 MIR638-201ENST00000385237 100 ntBASIC24.74■■□□□ 1.55
VARS2Q5ST30 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
VARS2Q5ST30 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
VARS2Q5ST30 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
VARS2Q5ST30 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
VARS2Q5ST30 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
VARS2Q5ST30 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
VARS2Q5ST30 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 MIR4466-201ENST00000606121 54 ntBASIC24.73■■□□□ 1.55
VARS2Q5ST30 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
VARS2Q5ST30 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
VARS2Q5ST30 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
VARS2Q5ST30 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
VARS2Q5ST30 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
VARS2Q5ST30 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.72■■□□□ 1.55
VARS2Q5ST30 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.72■■□□□ 1.55
VARS2Q5ST30 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
VARS2Q5ST30 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.72■■□□□ 1.55
VARS2Q5ST30 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.72■■□□□ 1.55
VARS2Q5ST30 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
VARS2Q5ST30 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.72■■□□□ 1.55
VARS2Q5ST30 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.71■■□□□ 1.55
VARS2Q5ST30 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.71■■□□□ 1.55
VARS2Q5ST30 AL512631.2-201ENST00000604634 923 ntBASIC24.71■■□□□ 1.55
VARS2Q5ST30 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
VARS2Q5ST30 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VARS2Q5ST30 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.71■■□□□ 1.55
VARS2Q5ST30 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.7■■□□□ 1.55
VARS2Q5ST30 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VARS2Q5ST30 AC004448.1-201ENST00000458332 883 ntBASIC24.7■■□□□ 1.54
VARS2Q5ST30 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.7■■□□□ 1.54
VARS2Q5ST30 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.7■■□□□ 1.54
VARS2Q5ST30 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VARS2Q5ST30 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.7■■□□□ 1.54
VARS2Q5ST30 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.69■■□□□ 1.54
VARS2Q5ST30 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
VARS2Q5ST30 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.69■■□□□ 1.54
VARS2Q5ST30 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VARS2Q5ST30 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
VARS2Q5ST30 MIR6089-201ENST00000616698 64 ntBASIC24.69■■□□□ 1.54
VARS2Q5ST30 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.69■■□□□ 1.54
VARS2Q5ST30 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
VARS2Q5ST30 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.69■■□□□ 1.54
VARS2Q5ST30 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
VARS2Q5ST30 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
VARS2Q5ST30 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VARS2Q5ST30 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.68■■□□□ 1.54
VARS2Q5ST30 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
VARS2Q5ST30 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.67■■□□□ 1.54
VARS2Q5ST30 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VARS2Q5ST30 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
VARS2Q5ST30 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
VARS2Q5ST30 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VARS2Q5ST30 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.67■■□□□ 1.54
VARS2Q5ST30 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.67■■□□□ 1.54
VARS2Q5ST30 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
VARS2Q5ST30 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VARS2Q5ST30 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VARS2Q5ST30 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
VARS2Q5ST30 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
VARS2Q5ST30 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.66■■□□□ 1.54
VARS2Q5ST30 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
VARS2Q5ST30 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VARS2Q5ST30 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VARS2Q5ST30 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
VARS2Q5ST30 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VARS2Q5ST30 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VARS2Q5ST30 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
VARS2Q5ST30 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
VARS2Q5ST30 AL139246.5-201ENST00000606645 996 ntBASIC24.64■■□□□ 1.54
VARS2Q5ST30 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
VARS2Q5ST30 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms