Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YHR214WYHR214W 612 nt6.58□□□□□ -1.36
UBP3Q01477 YIL077CYIL077C 963 nt6.58□□□□□ -1.36
UBP3Q01477 DAL2YIR029W 1032 nt6.58□□□□□ -1.36
UBP3Q01477 CTK2YJL006C 972 nt6.58□□□□□ -1.36
UBP3Q01477 ICS3YJL077C 396 nt6.58□□□□□ -1.36
UBP3Q01477 YAR066WYAR066W 612 nt6.58□□□□□ -1.36
UBP3Q01477 YMR119W-AYMR119W-A 375 nt6.58□□□□□ -1.36
UBP3Q01477 MCT1YOR221C 1083 nt6.58□□□□□ -1.36
UBP3Q01477 ATG29YPL166W 642 nt6.58□□□□□ -1.36
UBP3Q01477 UBC5YDR059C 447 nt6.57□□□□□ -1.36
UBP3Q01477 ERG26YGL001C 1050 nt6.57□□□□□ -1.36
UBP3Q01477 YHR070C-AYHR070C-A 411 nt6.57□□□□□ -1.36
UBP3Q01477 MRPL6YHR147C 645 nt6.57□□□□□ -1.36
UBP3Q01477 YHR213W-AYHR213W-A 234 nt6.57□□□□□ -1.36
UBP3Q01477 DOT5YIL010W 648 nt6.57□□□□□ -1.36
UBP3Q01477 JNM1YMR294W 1122 nt6.57□□□□□ -1.36
UBP3Q01477 YNL285WYNL285W 372 nt6.57□□□□□ -1.36
UBP3Q01477 YAP7YOL028C 738 nt6.57□□□□□ -1.36
UBP3Q01477 PPR1YLR014C 2715 nt6.56□□□□□ -1.36
UBP3Q01477 MDM31YHR194W 1740 nt6.56□□□□□ -1.36
UBP3Q01477 ATG1YGL180W 2694 nt6.56□□□□□ -1.36 RIP-Chip
UBP3Q01477 GPT2YKR067W 2232 nt6.56□□□□□ -1.36
UBP3Q01477 WHI2YOR043W 1461 nt6.56□□□□□ -1.36 RIP-Chip
UBP3Q01477 YDL026WYDL026W 312 nt6.56□□□□□ -1.36
UBP3Q01477 RPC53YDL150W 1269 nt6.56□□□□□ -1.36 RIP-Chip
UBP3Q01477 KRE28YDR532C 1158 nt6.56□□□□□ -1.36 RIP-Chip
UBP3Q01477 WSS1YHR134W 810 nt6.56□□□□□ -1.36
UBP3Q01477 MPM1YJL066C 759 nt6.56□□□□□ -1.36
UBP3Q01477 YNL097W-AYNL097W-A 156 nt6.56□□□□□ -1.36
UBP3Q01477 SUI3YPL237W 858 nt6.56□□□□□ -1.36
UBP3Q01477 GCR2YNL199C 1605 nt6.56□□□□□ -1.36
UBP3Q01477 YLL067CYLL067C 3618 nt6.56□□□□□ -1.36
UBP3Q01477 TFG1YGR186W 2208 nt6.56□□□□□ -1.36 RIP-Chip
UBP3Q01477 HFI1YPL254W 1467 nt6.55□□□□□ -1.36
UBP3Q01477 MPP10YJR002W 1782 nt6.55□□□□□ -1.36
UBP3Q01477 YGR273CYGR273C 525 nt6.55□□□□□ -1.36
UBP3Q01477 QRI5YLR204W 336 nt6.55□□□□□ -1.36
UBP3Q01477 VPS20YMR077C 666 nt6.55□□□□□ -1.36
UBP3Q01477 VPS68YOL129W 555 nt6.55□□□□□ -1.36
UBP3Q01477 THI80YOR143C 960 nt6.55□□□□□ -1.36 RIP-Chip
UBP3Q01477 YBR292CYBR292C 372 nt6.55□□□□□ -1.36
UBP3Q01477 KTR5YNL029C 1569 nt6.55□□□□□ -1.36 RIP-Chip
UBP3Q01477 GEP7YGL057C 864 nt6.54□□□□□ -1.36
UBP3Q01477 YLR366WYLR366W 306 nt6.54□□□□□ -1.36
UBP3Q01477 CCZ1YBR131W 2115 nt6.54□□□□□ -1.36
UBP3Q01477 ICL1YER065C 1674 nt6.54□□□□□ -1.36
UBP3Q01477 SMP1YBR182C 1359 nt6.54□□□□□ -1.36
UBP3Q01477 SKI2YLR398C 3864 nt6.53□□□□□ -1.36 RIP-Chip
UBP3Q01477 MTF2YDL044C 1323 nt6.53□□□□□ -1.36 RIP-Chip
UBP3Q01477 RRP14YKL082C 1305 nt6.53□□□□□ -1.36
UBP3Q01477 YEL020CYEL020C 1683 nt6.53□□□□□ -1.36
UBP3Q01477 YDR015CYDR015C 240 nt6.53□□□□□ -1.36
UBP3Q01477 PIB1YDR313C 861 nt6.53□□□□□ -1.36 RIP-Chip
UBP3Q01477 CAD1YDR423C 1230 nt6.53□□□□□ -1.36
UBP3Q01477 YLL047WYLL047W 384 nt6.53□□□□□ -1.36
UBP3Q01477 BLS1YLR408C 369 nt6.53□□□□□ -1.36
UBP3Q01477 SFT2YBL102W 648 nt6.53□□□□□ -1.36
UBP3Q01477 NRG2YBR066C 663 nt6.53□□□□□ -1.36
UBP3Q01477 RRP15YPR143W 753 nt6.53□□□□□ -1.36
UBP3Q01477 GUD1YDL238C 1470 nt6.53□□□□□ -1.36
UBP3Q01477 GIP1YBR045C 1920 nt6.52□□□□□ -1.37
UBP3Q01477 PFK2YMR205C 2880 nt6.52□□□□□ -1.37
UBP3Q01477 SHR3YDL212W 633 nt6.52□□□□□ -1.37
UBP3Q01477 YDL218WYDL218W 954 nt6.52□□□□□ -1.37
UBP3Q01477 CAF16YFL028C 870 nt6.52□□□□□ -1.37
UBP3Q01477 COG7YGL005C 840 nt6.52□□□□□ -1.37
UBP3Q01477 YNG2YHR090C 849 nt6.52□□□□□ -1.37
UBP3Q01477 YLR124WYLR124W 345 nt6.52□□□□□ -1.37
UBP3Q01477 ZRT2YLR130C 1269 nt6.52□□□□□ -1.37
UBP3Q01477 YML090WYML090W 387 nt6.52□□□□□ -1.37
UBP3Q01477 HRT1YOL133W 366 nt6.52□□□□□ -1.37
UBP3Q01477 KEL1YHR158C 3495 nt6.52□□□□□ -1.37
UBP3Q01477 CLA4YNL298W 2529 nt6.52□□□□□ -1.37 RIP-Chip
UBP3Q01477 NHA1YLR138W 2958 nt6.52□□□□□ -1.37
UBP3Q01477 AFG1YEL052W 1530 nt6.51□□□□□ -1.37
UBP3Q01477 YKR015CYKR015C 1707 nt6.51□□□□□ -1.37
UBP3Q01477 PCL2YDL127W 927 nt6.51□□□□□ -1.37
UBP3Q01477 RSM10YDR041W 612 nt6.51□□□□□ -1.37
UBP3Q01477 ARD1YHR013C 717 nt6.51□□□□□ -1.37
UBP3Q01477 LDS1YAL018C 978 nt6.51□□□□□ -1.37
UBP3Q01477 SUI2YJR007W 915 nt6.51□□□□□ -1.37
UBP3Q01477 RPS5YJR123W 678 nt6.51□□□□□ -1.37
UBP3Q01477 YKL107WYKL107W 930 nt6.51□□□□□ -1.37
UBP3Q01477 PSY3YLR376C 729 nt6.51□□□□□ -1.37
UBP3Q01477 YOL162WYOL162W 648 nt6.51□□□□□ -1.37
UBP3Q01477 TIF5YPR041W 1218 nt6.51□□□□□ -1.37
UBP3Q01477 ANT1YPR128C 987 nt6.51□□□□□ -1.37
UBP3Q01477 IBA57YJR122W 1494 nt6.51□□□□□ -1.37 RIP-Chip
UBP3Q01477 YML133CYML133C 4125 nt6.5□□□□□ -1.37
UBP3Q01477 MRPL1YDR116C 858 nt6.5□□□□□ -1.37
UBP3Q01477 NSE3YDR288W 912 nt6.5□□□□□ -1.37
UBP3Q01477 YDR396WYDR396W 501 nt6.5□□□□□ -1.37
UBP3Q01477 tR(ACG)DtR(ACG)D 73 nt6.5□□□□□ -1.37
UBP3Q01477 tR(ACG)EtR(ACG)E 73 nt6.5□□□□□ -1.37
UBP3Q01477 tR(ACG)KtR(ACG)K 73 nt6.5□□□□□ -1.37
UBP3Q01477 tR(ACG)LtR(ACG)L 73 nt6.5□□□□□ -1.37
UBP3Q01477 tR(ACG)OtR(ACG)O 73 nt6.5□□□□□ -1.37
UBP3Q01477 GRE3YHR104W 984 nt6.5□□□□□ -1.37
UBP3Q01477 YHR112CYHR112C 1137 nt6.5□□□□□ -1.37
UBP3Q01477 YLL059CYLL059C 507 nt6.5□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 34.1 ms