Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HSPG2P98160 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HSPG2P98160 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.71□□□□□ -0.05
HSPG2P98160 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.71□□□□□ -0.05
HSPG2P98160 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.71□□□□□ -0.05
HSPG2P98160 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HSPG2P98160 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.71□□□□□ -0.05
HSPG2P98160 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.71□□□□□ -0.05
HSPG2P98160 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.71□□□□□ -0.05
HSPG2P98160 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.71□□□□□ -0.05
HSPG2P98160 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HSPG2P98160 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.71□□□□□ -0.06
HSPG2P98160 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.71□□□□□ -0.06
HSPG2P98160 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.71□□□□□ -0.06
HSPG2P98160 KRT18P61-201ENST00000585825 1298 ntBASIC14.7□□□□□ -0.06
HSPG2P98160 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HSPG2P98160 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HSPG2P98160 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HSPG2P98160 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.7□□□□□ -0.06
HSPG2P98160 AC099791.1-201ENST00000416440 715 ntBASIC14.7□□□□□ -0.06
HSPG2P98160 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.7□□□□□ -0.06
HSPG2P98160 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.7□□□□□ -0.06
HSPG2P98160 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HSPG2P98160 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HSPG2P98160 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HSPG2P98160 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HSPG2P98160 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
HSPG2P98160 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HSPG2P98160 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.69□□□□□ -0.06
HSPG2P98160 AC008764.7-201ENST00000593779 1081 ntBASIC14.69□□□□□ -0.06
HSPG2P98160 MIR6722-201ENST00000617286 78 ntBASIC14.69□□□□□ -0.06
HSPG2P98160 AC136469.2-201ENST00000623944 1028 ntBASIC14.69□□□□□ -0.06
HSPG2P98160 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.69□□□□□ -0.06
HSPG2P98160 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HSPG2P98160 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HSPG2P98160 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HSPG2P98160 AC233992.3-201ENST00000607491 485 ntBASIC14.69□□□□□ -0.06
HSPG2P98160 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.69□□□□□ -0.06
HSPG2P98160 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.69□□□□□ -0.06
HSPG2P98160 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.69□□□□□ -0.06
HSPG2P98160 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HSPG2P98160 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HSPG2P98160 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HSPG2P98160 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HSPG2P98160 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HSPG2P98160 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC14.68□□□□□ -0.06
HSPG2P98160 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HSPG2P98160 AC004448.1-201ENST00000458332 883 ntBASIC14.68□□□□□ -0.06
HSPG2P98160 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.68□□□□□ -0.06
HSPG2P98160 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.68□□□□□ -0.06
HSPG2P98160 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HSPG2P98160 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HSPG2P98160 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.68□□□□□ -0.06
HSPG2P98160 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HSPG2P98160 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.67□□□□□ -0.06
HSPG2P98160 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.67□□□□□ -0.06
HSPG2P98160 AC011298.3-201ENST00000615796 283 ntBASIC14.67□□□□□ -0.06
HSPG2P98160 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HSPG2P98160 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HSPG2P98160 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HSPG2P98160 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HSPG2P98160 AC006455.2-201ENST00000429931 906 ntBASIC14.67□□□□□ -0.06
HSPG2P98160 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HSPG2P98160 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC14.67□□□□□ -0.06
HSPG2P98160 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.67□□□□□ -0.06
HSPG2P98160 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HSPG2P98160 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.67□□□□□ -0.06
HSPG2P98160 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HSPG2P98160 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
HSPG2P98160 TSPY26P-201ENST00000476365 1326 ntBASIC14.66□□□□□ -0.06
HSPG2P98160 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.66□□□□□ -0.06
HSPG2P98160 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.66□□□□□ -0.06
HSPG2P98160 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HSPG2P98160 AC027612.3-201ENST00000413684 1047 ntBASIC14.66□□□□□ -0.06
HSPG2P98160 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HSPG2P98160 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HSPG2P98160 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HSPG2P98160 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HSPG2P98160 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC14.65□□□□□ -0.06
HSPG2P98160 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.65□□□□□ -0.06
HSPG2P98160 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.65□□□□□ -0.06
HSPG2P98160 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.65□□□□□ -0.06
HSPG2P98160 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HSPG2P98160 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HSPG2P98160 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HSPG2P98160 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.64□□□□□ -0.07
HSPG2P98160 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.64□□□□□ -0.07
HSPG2P98160 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.64□□□□□ -0.07
HSPG2P98160 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.64□□□□□ -0.07
HSPG2P98160 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.64□□□□□ -0.07
HSPG2P98160 AC104771.1-201ENST00000603335 964 ntBASIC14.64□□□□□ -0.07
HSPG2P98160 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HSPG2P98160 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.64□□□□□ -0.07
HSPG2P98160 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms