Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ADGRV1-222ENST00000639821 893 ntTSL 3 BASIC9.88□□□□□ -0.838e-6■■■■□ 25.1
LSM11P83369 ABCC5-206ENST00000437205 5852 ntTSL 59.85□□□□□ -0.838e-6■■■■□ 25.1
LSM11P83369 EIF4G1-223ENST00000444134 558 ntTSL 59.76□□□□□ -0.858e-6■■■■□ 25.1
LSM11P83369 ABCC5-202ENST00000334444 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.858e-6■■■■□ 25.1
LSM11P83369 EHMT1-222ENST00000629417 882 ntTSL 39.7□□□□□ -0.868e-6■■■■□ 25.1
LSM11P83369 EIF4G1-220ENST00000440448 578 ntTSL 49.7□□□□□ -0.868e-6■■■■□ 25.1
LSM11P83369 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.878e-6■■■■□ 25.1
LSM11P83369 TDRD3-208ENST00000535286 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.898e-6■■■■□ 25.1
LSM11P83369 ADGRV1-228ENST00000640256 904 ntTSL 59.52□□□□□ -0.898e-6■■■■□ 25.1
LSM11P83369 FAM126A-209ENST00000498833 638 ntTSL 39.45□□□□□ -0.98e-6■■■■□ 25.1
LSM11P83369 CNOT6L-204ENST00000506166 781 ntTSL 29.43□□□□□ -0.98e-6■■■■□ 25.1
LSM11P83369 COX7C-204ENST00000510447 581 ntTSL 39.37□□□□□ -0.918e-6■■■■□ 25.1
LSM11P83369 SUPV3L1-206ENST00000486661 518 ntTSL 59.35□□□□□ -0.918e-6■■■■□ 25.1
LSM11P83369 SUPV3L1-205ENST00000483572 1025 ntTSL 59.35□□□□□ -0.918e-6■■■■□ 25.1
LSM11P83369 EHMT1-237ENST00000637261 4208 ntTSL 59.31□□□□□ -0.928e-6■■■■□ 25.1
LSM11P83369 ADGRV1-237ENST00000640815 1522 ntTSL 2 BASIC9.26□□□□□ -0.938e-6■■■■□ 25.1
LSM11P83369 C11orf49-206ENST00000525279 560 ntTSL 49.15□□□□□ -0.948e-6■■■■□ 25.1
LSM11P83369 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.968e-6■■■■□ 25.1
LSM11P83369 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC9.06□□□□□ -0.968e-6■■■■□ 25.1
LSM11P83369 POGZ-215ENST00000495253 617 ntTSL 29.04□□□□□ -0.968e-6■■■■□ 25.1
LSM11P83369 COX7C-207ENST00000515763 347 ntAPPRIS ALT1 TSL 4 BASIC9.02□□□□□ -0.978e-6■■■■□ 25.1
LSM11P83369 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.978e-6■■■■□ 25.1
LSM11P83369 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.972e-15■■■■□ 25.1
LSM11P83369 MTCO1P12-201ENST00000414273 1543 ntBASIC8.97□□□□□ -0.978e-6■■■■□ 25.1
LSM11P83369 SUPV3L1-202ENST00000422378 794 ntTSL 58.96□□□□□ -0.988e-6■■■■□ 25.1
LSM11P83369 KIF13A-209ENST00000505588 212 ntTSL 58.94□□□□□ -0.982e-15■■■■□ 25.1
LSM11P83369 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.992e-7■■■■□ 25.1
LSM11P83369 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.998e-6■■■■□ 25.1
LSM11P83369 DUSP22-204ENST00000603290 548 ntTSL 48.8□□□□□ -18e-6■■■■□ 25.1
LSM11P83369 ACOX1-211ENST00000591857 681 ntTSL 38.67□□□□□ -1.022e-7■■■■□ 25.1
LSM11P83369 C11orf49-211ENST00000527234 593 ntTSL 58.65□□□□□ -1.028e-6■■■■□ 25.1
LSM11P83369 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC8.6□□□□□ -1.038e-6■■■■□ 25.1
LSM11P83369 ADGRV1-219ENST00000639530 1101 ntTSL 58.53□□□□□ -1.048e-6■■■■□ 25.1
LSM11P83369 COX7C-206ENST00000513124 693 ntTSL 58.48□□□□□ -1.058e-6■■■■□ 25.1
LSM11P83369 C11orf49-219ENST00000532840 719 ntTSL 28.41□□□□□ -1.068e-6■■■■□ 25.1
LSM11P83369 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.072e-15■■■■□ 25.1
LSM11P83369 BRAP-203ENST00000547043 1543 ntTSL 38.34□□□□□ -1.088e-6■■■■□ 25.1
LSM11P83369 FAM126A-205ENST00000440481 6337 ntTSL 1 (best)8.31□□□□□ -1.088e-6■■■■□ 25.1
LSM11P83369 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.12e-15■■■■□ 25.1
LSM11P83369 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.118e-6■■■■□ 25.1
LSM11P83369 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.138e-6■■■■□ 25.1
LSM11P83369 COX7C-202ENST00000505430 496 ntTSL 37.9□□□□□ -1.148e-6■■■■□ 25.1
LSM11P83369 COX7C-205ENST00000511472 369 ntTSL 27.9□□□□□ -1.148e-6■■■■□ 25.1
LSM11P83369 DPY30-206ENST00000446765 1519 ntTSL 57.83□□□□□ -1.168e-6■■■■□ 25.1
LSM11P83369 SUPV3L1-204ENST00000478227 597 ntTSL 57.81□□□□□ -1.168e-6■■■■□ 25.1
LSM11P83369 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.178e-6■■■■□ 25.1
LSM11P83369 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC7.57□□□□□ -1.28e-6■■■■□ 25.1
LSM11P83369 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.51□□□□□ -1.218e-6■■■■□ 25.1
LSM11P83369 C11orf49-221ENST00000534249 626 ntTSL 57.47□□□□□ -1.218e-6■■■■□ 25.1
LSM11P83369 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.218e-6■■■■□ 25.1
LSM11P83369 C11orf49-213ENST00000527667 530 ntTSL 47.43□□□□□ -1.228e-6■■■■□ 25.1
LSM11P83369 LARP4B-203ENST00000412411 432 ntTSL 37.36□□□□□ -1.238e-6■■■■□ 25.1
LSM11P83369 C11orf49-218ENST00000532633 597 ntTSL 47.36□□□□□ -1.238e-6■■■■□ 25.1
LSM11P83369 CNOT6L-202ENST00000504804 1925 ntTSL 57.34□□□□□ -1.238e-6■■■■□ 25.1
LSM11P83369 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.29□□□□□ -1.248e-6■■■■□ 25.1
LSM11P83369 ADGRV1-215ENST00000638990 2433 ntTSL 57.28□□□□□ -1.248e-6■■■■□ 25.1
LSM11P83369 CNOT6L-206ENST00000512485 1890 ntTSL 57.14□□□□□ -1.278e-6■■■■□ 25.1
LSM11P83369 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.6□□□□□ -1.358e-6■■■■□ 25.1
LSM11P83369 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.372e-15■■■■□ 25.1
LSM11P83369 DNAJB11-204ENST00000495390 4079 ntTSL 26.34□□□□□ -1.41e-10■■■■□ 25.1
LSM11P83369 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.48e-6■■■■□ 25.1
LSM11P83369 ADGRV1-233ENST00000640407 5673 ntTSL 56.27□□□□□ -1.418e-6■■■■□ 25.1
LSM11P83369 ADGRV1-202ENST00000425867 8141 ntTSL 56.15□□□□□ -1.438e-6■■■■□ 25.1
LSM11P83369 SEH1L-210ENST00000592582 4072 ntTSL 1 (best)6.01□□□□□ -1.454e-20■■■■□ 25.1
LSM11P83369 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.518e-6■■■■□ 25.1
LSM11P83369 POGZ-202ENST00000358476 6459 ntTSL 25.48□□□□□ -1.538e-6■■■■□ 25.1
LSM11P83369 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.45□□□□□ -1.548e-6■■■■□ 25.1
LSM11P83369 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.558e-6■■■■□ 25.1
LSM11P83369 POGZ-207ENST00000441516 526 ntTSL 35.31□□□□□ -1.568e-6■■■■□ 25.1
LSM11P83369 ADGRV1-211ENST00000638510 6503 ntTSL 1 (best)4.93□□□□□ -1.628e-6■■■■□ 25.1
LSM11P83369 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.5□□□□□ -1.698e-6■■■■□ 25.1
LSM11P83369 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.858e-6■■■■□ 25.1
LSM11P83369 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.898e-6■■■■□ 25.1
LSM11P83369 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.98e-6■■■■□ 25.1
LSM11P83369 PRH1-205ENST00000541977 507 ntTSL 212.67□□□□□ -0.386e-7■■■■□ 25
LSM11P83369 PRR4-214ENST00000546317 281 ntTSL 511.42□□□□□ -0.586e-7■■■■□ 25
LSM11P83369 TAS2R14-201ENST00000381852 1662 ntTSL 211.25□□□□□ -0.616e-7■■■■□ 25
LSM11P83369 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.616e-7■■■■□ 25
LSM11P83369 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.796e-7■■■■□ 25
LSM11P83369 PRH1-202ENST00000536086 554 ntTSL 58.75□□□□□ -1.016e-7■■■■□ 25
LSM11P83369 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.486e-7■■■■□ 25
LSM11P83369 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.395e-8■■■■□ 24.9
LSM11P83369 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -05e-8■■■■□ 24.9
LSM11P83369 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.497e-8■■■■□ 24.9
LSM11P83369 AC105118.1-201ENST00000523002 544 ntTSL 3 BASIC10.29□□□□□ -0.761e-14■■■■□ 24.9
LSM11P83369 PTMA-206ENST00000412128 863 ntTSL 321.2■□□□□ 0.984e-17■■■■□ 24.9
LSM11P83369 PTMA-207ENST00000440384 222 ntTSL 316.72■□□□□ 0.274e-8■■■■□ 24.9
LSM11P83369 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.282e-7■■■■□ 24.8
LSM11P83369 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.47■□□□□ 0.232e-7■■■■□ 24.8
LSM11P83369 CDC25A-204ENST00000443342 777 ntTSL 311.64□□□□□ -0.552e-7■■■■□ 24.8
LSM11P83369 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.67□□□□□ -0.382e-6■■■■□ 24.8
LSM11P83369 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.452e-6■■■■□ 24.8
LSM11P83369 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC11.77□□□□□ -0.532e-6■■■■□ 24.8
LSM11P83369 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.752e-6■■■■□ 24.8
LSM11P83369 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.53e-8■■■■□ 24.8
LSM11P83369 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.683e-8■■■■□ 24.8
LSM11P83369 GSDMB-205ENST00000418519 1597 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.743e-8■■■■□ 24.8
LSM11P83369 GSDMB-209ENST00000479136 2209 ntTSL 1 (best)10.09□□□□□ -0.793e-8■■■■□ 24.8
LSM11P83369 GSDMB-203ENST00000394175 1626 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.973e-8■■■■□ 24.8
LSM11P83369 GSDMB-208ENST00000477054 4655 ntTSL 58.83□□□□□ -13e-8■■■■□ 24.8
Retrieved 100 of 11,495 protein–RNA pairs in 59.6 ms