Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB4AP20338 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB4AP20338 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RAB4AP20338 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB4AP20338 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB4AP20338 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB4AP20338 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB4AP20338 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB4AP20338 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB4AP20338 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB4AP20338 AC108673.1-201ENST00000510422 1159 ntBASIC17.65■□□□□ 0.42
RAB4AP20338 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB4AP20338 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB4AP20338 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB4AP20338 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB4AP20338 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB4AP20338 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
RAB4AP20338 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB4AP20338 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB4AP20338 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB4AP20338 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB4AP20338 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB4AP20338 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB4AP20338 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB4AP20338 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RAB4AP20338 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB4AP20338 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB4AP20338 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB4AP20338 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB4AP20338 AC092667.1-201ENST00000434301 2586 ntBASIC17.63■□□□□ 0.41
RAB4AP20338 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB4AP20338 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB4AP20338 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB4AP20338 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB4AP20338 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB4AP20338 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB4AP20338 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB4AP20338 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.61■□□□□ 0.41
RAB4AP20338 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB4AP20338 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB4AP20338 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB4AP20338 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB4AP20338 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB4AP20338 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB4AP20338 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB4AP20338 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAB4AP20338 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB4AP20338 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB4AP20338 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB4AP20338 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB4AP20338 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB4AP20338 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
RAB4AP20338 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB4AP20338 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB4AP20338 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB4AP20338 AF106564.1-201ENST00000607058 2553 ntBASIC17.6■□□□□ 0.41
RAB4AP20338 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB4AP20338 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB4AP20338 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB4AP20338 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB4AP20338 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB4AP20338 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB4AP20338 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB4AP20338 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAB4AP20338 AC136428.2-201ENST00000563187 214 ntBASIC17.59■□□□□ 0.41
RAB4AP20338 MIR6090-201ENST00000622481 60 ntBASIC17.59■□□□□ 0.41
RAB4AP20338 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB4AP20338 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB4AP20338 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.58■□□□□ 0.41
RAB4AP20338 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RAB4AP20338 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB4AP20338 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB4AP20338 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB4AP20338 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB4AP20338 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAB4AP20338 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RAB4AP20338 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB4AP20338 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAB4AP20338 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RAB4AP20338 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB4AP20338 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB4AP20338 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB4AP20338 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB4AP20338 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB4AP20338 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB4AP20338 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms