Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
MRPL3P09001 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
MRPL3P09001 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.77■□□□□ 0.91
MRPL3P09001 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MRPL3P09001 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.76■□□□□ 0.91
MRPL3P09001 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MRPL3P09001 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL3P09001 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.76■□□□□ 0.91
MRPL3P09001 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL3P09001 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL3P09001 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.76■□□□□ 0.91
MRPL3P09001 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL3P09001 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MRPL3P09001 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.76■□□□□ 0.91
MRPL3P09001 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL3P09001 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MRPL3P09001 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MRPL3P09001 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL3P09001 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL3P09001 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.74■□□□□ 0.91
MRPL3P09001 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL3P09001 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MRPL3P09001 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MRPL3P09001 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
MRPL3P09001 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL3P09001 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL3P09001 C9orf163-202ENST00000624034 2573 ntBASIC20.73■□□□□ 0.91
MRPL3P09001 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.73■□□□□ 0.91
MRPL3P09001 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.73■□□□□ 0.91
MRPL3P09001 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
MRPL3P09001 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL3P09001 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MRPL3P09001 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MRPL3P09001 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MRPL3P09001 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.72■□□□□ 0.91
MRPL3P09001 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPL3P09001 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.72■□□□□ 0.91
MRPL3P09001 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MRPL3P09001 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPL3P09001 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL3P09001 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL3P09001 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL3P09001 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.7■□□□□ 0.9
MRPL3P09001 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.7■□□□□ 0.9
MRPL3P09001 RAP2CP1-202ENST00000605179 643 ntBASIC20.7■□□□□ 0.9
MRPL3P09001 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
MRPL3P09001 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL3P09001 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MRPL3P09001 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
MRPL3P09001 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MRPL3P09001 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.69■□□□□ 0.9
MRPL3P09001 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPL3P09001 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPL3P09001 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.67■□□□□ 0.9
MRPL3P09001 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL3P09001 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.67■□□□□ 0.9
MRPL3P09001 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.67■□□□□ 0.9
MRPL3P09001 AC026202.3-201ENST00000600805 1127 ntBASIC20.67■□□□□ 0.9
MRPL3P09001 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
MRPL3P09001 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL3P09001 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL3P09001 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL3P09001 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL3P09001 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.66■□□□□ 0.9
MRPL3P09001 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.66■□□□□ 0.9
MRPL3P09001 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.66■□□□□ 0.9
MRPL3P09001 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL3P09001 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL3P09001 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL3P09001 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MRPL3P09001 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.65■□□□□ 0.9
MRPL3P09001 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.65■□□□□ 0.9
MRPL3P09001 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms