Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 AC008813.1-201ENST00000536597 885 ntBASIC20.1■□□□□ 0.81
HLA-DQB1P01920 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 ECEL1P1-201ENST00000373592 1742 ntBASIC20.1■□□□□ 0.81
HLA-DQB1P01920 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB1P01920 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB1P01920 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB1P01920 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB1P01920 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L13-201ENST00000554103 1267 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L15-201ENST00000611059 1267 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L23-201ENST00000615195 1269 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L24-201ENST00000617576 1269 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L22-201ENST00000618238 1269 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L20-201ENST00000619712 1269 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L21-201ENST00000622058 1269 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L10-201ENST00000622460 1267 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 DUX4L25-201ENST00000624915 1269 ntBASIC20.09■□□□□ 0.81
HLA-DQB1P01920 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB1P01920 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB1P01920 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DQB1P01920 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB1P01920 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.08■□□□□ 0.81
HLA-DQB1P01920 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HLA-DQB1P01920 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB1P01920 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB1P01920 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQB1P01920 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQB1P01920 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQB1P01920 GUSBP5-202ENST00000510805 1989 ntBASIC20.08■□□□□ 0.8
HLA-DQB1P01920 AC007375.3-201ENST00000600936 2314 ntBASIC20.08■□□□□ 0.8
HLA-DQB1P01920 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
HLA-DQB1P01920 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB1P01920 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB1P01920 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB1P01920 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB1P01920 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB1P01920 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DQB1P01920 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms