Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PFDN1O60925 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PFDN1O60925 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN1O60925 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN1O60925 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.9■□□□□ 0.94
PFDN1O60925 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN1O60925 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.9■□□□□ 0.94
PFDN1O60925 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PFDN1O60925 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PFDN1O60925 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PFDN1O60925 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PFDN1O60925 AC018358.1-201ENST00000631079 1402 ntBASIC20.89■□□□□ 0.94
PFDN1O60925 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PFDN1O60925 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PFDN1O60925 AP003733.4-201ENST00000623785 1697 ntBASIC20.89■□□□□ 0.93
PFDN1O60925 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PFDN1O60925 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PFDN1O60925 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PFDN1O60925 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PFDN1O60925 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PFDN1O60925 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.88■□□□□ 0.93
PFDN1O60925 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PFDN1O60925 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PFDN1O60925 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PFDN1O60925 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.88■□□□□ 0.93
PFDN1O60925 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PFDN1O60925 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PFDN1O60925 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PFDN1O60925 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PFDN1O60925 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PFDN1O60925 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PFDN1O60925 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PFDN1O60925 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PFDN1O60925 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PFDN1O60925 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.86■□□□□ 0.93
PFDN1O60925 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PFDN1O60925 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.86■□□□□ 0.93
PFDN1O60925 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PFDN1O60925 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PFDN1O60925 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PFDN1O60925 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PFDN1O60925 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PFDN1O60925 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PFDN1O60925 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PFDN1O60925 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN1O60925 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PFDN1O60925 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.84■□□□□ 0.93
PFDN1O60925 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PFDN1O60925 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN1O60925 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN1O60925 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.84■□□□□ 0.93
PFDN1O60925 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PFDN1O60925 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PFDN1O60925 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.84■□□□□ 0.93
PFDN1O60925 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PFDN1O60925 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN1O60925 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.83■□□□□ 0.93
PFDN1O60925 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PFDN1O60925 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PFDN1O60925 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PFDN1O60925 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PFDN1O60925 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PFDN1O60925 AC141586.4-201ENST00000624558 1573 ntBASIC20.83■□□□□ 0.92
PFDN1O60925 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
PFDN1O60925 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PFDN1O60925 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 AF106564.1-201ENST00000607058 2553 ntBASIC20.82■□□□□ 0.92
PFDN1O60925 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.82■□□□□ 0.92
PFDN1O60925 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PFDN1O60925 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN1O60925 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN1O60925 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.81■□□□□ 0.92
PFDN1O60925 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PFDN1O60925 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.81■□□□□ 0.92
PFDN1O60925 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.81■□□□□ 0.92
PFDN1O60925 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.81■□□□□ 0.92
PFDN1O60925 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.8■□□□□ 0.92
PFDN1O60925 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PFDN1O60925 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN1O60925 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PFDN1O60925 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PFDN1O60925 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PFDN1O60925 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN1O60925 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PFDN1O60925 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.8■□□□□ 0.92
PFDN1O60925 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PFDN1O60925 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN1O60925 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
PFDN1O60925 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PFDN1O60925 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN1O60925 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
PFDN1O60925 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PFDN1O60925 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PFDN1O60925 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN1O60925 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms