Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TSPAN1O60635 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.39■■□□□ 1.65
TSPAN1O60635 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.38■■□□□ 1.65
TSPAN1O60635 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.38■■□□□ 1.65
TSPAN1O60635 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.38■■□□□ 1.65
TSPAN1O60635 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.38■■□□□ 1.65
TSPAN1O60635 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
TSPAN1O60635 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TSPAN1O60635 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TSPAN1O60635 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TSPAN1O60635 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.37■■□□□ 1.65
TSPAN1O60635 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.37■■□□□ 1.65
TSPAN1O60635 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TSPAN1O60635 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.37■■□□□ 1.65
TSPAN1O60635 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.36■■□□□ 1.65
TSPAN1O60635 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.36■■□□□ 1.65
TSPAN1O60635 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TSPAN1O60635 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.36■■□□□ 1.65
TSPAN1O60635 AC008406.3-201ENST00000620001 1374 ntBASIC25.35■■□□□ 1.65
TSPAN1O60635 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.35■■□□□ 1.65
TSPAN1O60635 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TSPAN1O60635 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
TSPAN1O60635 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.35■■□□□ 1.65
TSPAN1O60635 MIR3621-201ENST00000580529 85 ntBASIC25.35■■□□□ 1.65
TSPAN1O60635 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.35■■□□□ 1.65
TSPAN1O60635 MIR6722-201ENST00000617286 78 ntBASIC25.35■■□□□ 1.65
TSPAN1O60635 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.35■■□□□ 1.65
TSPAN1O60635 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.35■■□□□ 1.65
TSPAN1O60635 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TSPAN1O60635 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TSPAN1O60635 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.34■■□□□ 1.65
TSPAN1O60635 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.34■■□□□ 1.65
TSPAN1O60635 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.34■■□□□ 1.65
TSPAN1O60635 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
TSPAN1O60635 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
TSPAN1O60635 AC004448.1-201ENST00000458332 883 ntBASIC25.34■■□□□ 1.65
TSPAN1O60635 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.34■■□□□ 1.65
TSPAN1O60635 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.34■■□□□ 1.65
TSPAN1O60635 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.34■■□□□ 1.65
TSPAN1O60635 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.34■■□□□ 1.65
TSPAN1O60635 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TSPAN1O60635 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TSPAN1O60635 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TSPAN1O60635 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.33■■□□□ 1.65
TSPAN1O60635 AC131281.2-201ENST00000520478 145 ntBASIC25.33■■□□□ 1.65
TSPAN1O60635 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.33■■□□□ 1.65
TSPAN1O60635 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.33■■□□□ 1.65
TSPAN1O60635 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
TSPAN1O60635 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TSPAN1O60635 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TSPAN1O60635 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
TSPAN1O60635 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.32■■□□□ 1.64
TSPAN1O60635 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.32■■□□□ 1.64
TSPAN1O60635 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.32■■□□□ 1.64
TSPAN1O60635 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TSPAN1O60635 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
TSPAN1O60635 AC131274.2-201ENST00000580697 1507 ntBASIC25.32■■□□□ 1.64
TSPAN1O60635 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TSPAN1O60635 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TSPAN1O60635 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.31■■□□□ 1.64
TSPAN1O60635 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.31■■□□□ 1.64
TSPAN1O60635 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.31■■□□□ 1.64
TSPAN1O60635 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TSPAN1O60635 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.31■■□□□ 1.64
TSPAN1O60635 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.31■■□□□ 1.64
TSPAN1O60635 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.31■■□□□ 1.64
TSPAN1O60635 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TSPAN1O60635 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TSPAN1O60635 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TSPAN1O60635 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TSPAN1O60635 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.3■■□□□ 1.64
TSPAN1O60635 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.3■■□□□ 1.64
TSPAN1O60635 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TSPAN1O60635 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TSPAN1O60635 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TSPAN1O60635 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
TSPAN1O60635 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TSPAN1O60635 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TSPAN1O60635 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TSPAN1O60635 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.29■■□□□ 1.64
TSPAN1O60635 AL356740.2-201ENST00000601559 647 ntBASIC25.29■■□□□ 1.64
TSPAN1O60635 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.29■■□□□ 1.64
TSPAN1O60635 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.29■■□□□ 1.64
TSPAN1O60635 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TSPAN1O60635 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TSPAN1O60635 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.28■■□□□ 1.64
TSPAN1O60635 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TSPAN1O60635 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TSPAN1O60635 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
TSPAN1O60635 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TSPAN1O60635 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.28■■□□□ 1.64
TSPAN1O60635 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.28■■□□□ 1.64
TSPAN1O60635 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
TSPAN1O60635 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms