Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HLA-L-211ENST00000482052 1765 ntBASIC18.87■□□□□ 0.61
SSSCA1O60232 AL117328.2-201ENST00000624617 1940 ntBASIC18.87■□□□□ 0.61
SSSCA1O60232 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.86■□□□□ 0.61
SSSCA1O60232 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SSSCA1O60232 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.86■□□□□ 0.61
SSSCA1O60232 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.86■□□□□ 0.61
SSSCA1O60232 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSSCA1O60232 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSSCA1O60232 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSSCA1O60232 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.85■□□□□ 0.61
SSSCA1O60232 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SSSCA1O60232 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSSCA1O60232 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.85■□□□□ 0.61
SSSCA1O60232 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SSSCA1O60232 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SSSCA1O60232 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSSCA1O60232 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.85■□□□□ 0.61
SSSCA1O60232 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSSCA1O60232 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSSCA1O60232 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.84■□□□□ 0.61
SSSCA1O60232 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSSCA1O60232 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSSCA1O60232 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSSCA1O60232 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSSCA1O60232 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSSCA1O60232 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSSCA1O60232 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SSSCA1O60232 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSSCA1O60232 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.83■□□□□ 0.6
SSSCA1O60232 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSSCA1O60232 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.83■□□□□ 0.6
SSSCA1O60232 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSSCA1O60232 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SSSCA1O60232 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.83■□□□□ 0.6
SSSCA1O60232 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSSCA1O60232 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.82■□□□□ 0.6
SSSCA1O60232 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SSSCA1O60232 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.82■□□□□ 0.6
SSSCA1O60232 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.82■□□□□ 0.6
SSSCA1O60232 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSSCA1O60232 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSSCA1O60232 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.81■□□□□ 0.6
SSSCA1O60232 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SSSCA1O60232 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSSCA1O60232 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSSCA1O60232 DUX4L11-201ENST00000611504 1267 ntBASIC18.81■□□□□ 0.6
SSSCA1O60232 DUX4L12-201ENST00000614593 1267 ntBASIC18.81■□□□□ 0.6
SSSCA1O60232 DUX4L14-201ENST00000621227 1267 ntBASIC18.81■□□□□ 0.6
SSSCA1O60232 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.81■□□□□ 0.6
SSSCA1O60232 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSSCA1O60232 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSSCA1O60232 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.81■□□□□ 0.6
SSSCA1O60232 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSSCA1O60232 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.8■□□□□ 0.6
SSSCA1O60232 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSSCA1O60232 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSSCA1O60232 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.8■□□□□ 0.6
SSSCA1O60232 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSSCA1O60232 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
SSSCA1O60232 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.8■□□□□ 0.6
SSSCA1O60232 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSSCA1O60232 AC233723.2-201ENST00000623798 2106 ntBASIC18.79■□□□□ 0.6
SSSCA1O60232 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSSCA1O60232 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSSCA1O60232 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSSCA1O60232 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.79■□□□□ 0.6
SSSCA1O60232 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.79■□□□□ 0.6
SSSCA1O60232 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSSCA1O60232 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SSSCA1O60232 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.79■□□□□ 0.6
SSSCA1O60232 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SSSCA1O60232 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSSCA1O60232 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SSSCA1O60232 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSSCA1O60232 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.78■□□□□ 0.6
SSSCA1O60232 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSSCA1O60232 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSSCA1O60232 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSSCA1O60232 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.78■□□□□ 0.6
SSSCA1O60232 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms