Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC068473.5-201ENST00000616428 2072 ntBASIC22.61■■□□□ 1.21
UBFD1O14562 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBFD1O14562 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBFD1O14562 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
UBFD1O14562 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.6■■□□□ 1.21
UBFD1O14562 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
UBFD1O14562 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
UBFD1O14562 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBFD1O14562 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UBFD1O14562 RNF126P1-201ENST00000567452 1320 ntBASIC22.59■■□□□ 1.21
UBFD1O14562 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBFD1O14562 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.59■■□□□ 1.21
UBFD1O14562 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBFD1O14562 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBFD1O14562 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBFD1O14562 SPCS2P3-201ENST00000500401 656 ntBASIC22.59■■□□□ 1.21
UBFD1O14562 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
UBFD1O14562 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBFD1O14562 DUSP8P5-201ENST00000422884 1815 ntBASIC22.59■■□□□ 1.21
UBFD1O14562 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBFD1O14562 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBFD1O14562 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
UBFD1O14562 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.58■■□□□ 1.21
UBFD1O14562 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBFD1O14562 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.58■■□□□ 1.21
UBFD1O14562 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
UBFD1O14562 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.58■■□□□ 1.2
UBFD1O14562 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
UBFD1O14562 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UBFD1O14562 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UBFD1O14562 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.57■■□□□ 1.2
UBFD1O14562 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBFD1O14562 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
UBFD1O14562 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
UBFD1O14562 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBFD1O14562 RPS2P7-201ENST00000447334 885 ntBASIC22.56■■□□□ 1.2
UBFD1O14562 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.56■■□□□ 1.2
UBFD1O14562 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBFD1O14562 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBFD1O14562 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UBFD1O14562 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBFD1O14562 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBFD1O14562 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBFD1O14562 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBFD1O14562 AL592293.1-201ENST00000502889 1188 ntBASIC22.55■■□□□ 1.2
UBFD1O14562 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.55■■□□□ 1.2
UBFD1O14562 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
UBFD1O14562 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBFD1O14562 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBFD1O14562 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBFD1O14562 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.54■■□□□ 1.2
UBFD1O14562 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UBFD1O14562 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
UBFD1O14562 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.53■■□□□ 1.2
UBFD1O14562 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
UBFD1O14562 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.53■■□□□ 1.2
UBFD1O14562 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.53■■□□□ 1.2
UBFD1O14562 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
UBFD1O14562 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UBFD1O14562 AC012676.1-201ENST00000574705 1949 ntBASIC22.53■■□□□ 1.2
UBFD1O14562 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.52■■□□□ 1.2
UBFD1O14562 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.52■■□□□ 1.2
UBFD1O14562 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.52■■□□□ 1.2
UBFD1O14562 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UBFD1O14562 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
UBFD1O14562 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBFD1O14562 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.51■■□□□ 1.19
UBFD1O14562 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.51■■□□□ 1.19
UBFD1O14562 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.51■■□□□ 1.19
UBFD1O14562 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBFD1O14562 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UBFD1O14562 C9orf163-202ENST00000624034 2573 ntBASIC22.5■■□□□ 1.19
UBFD1O14562 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
UBFD1O14562 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBFD1O14562 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.5■■□□□ 1.19
UBFD1O14562 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBFD1O14562 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UBFD1O14562 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBFD1O14562 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBFD1O14562 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
UBFD1O14562 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
UBFD1O14562 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.49■■□□□ 1.19
UBFD1O14562 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
UBFD1O14562 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
UBFD1O14562 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBFD1O14562 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
UBFD1O14562 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.48■■□□□ 1.19
UBFD1O14562 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms