Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
CUX2O14529 AL138724.1-201ENST00000606771 1088 ntBASIC40.59■■■■■ 4.09
CUX2O14529 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC40.59■■■■■ 4.09
CUX2O14529 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC40.58■■■■■ 4.09
CUX2O14529 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC40.58■■■■■ 4.09
CUX2O14529 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC40.58■■■■■ 4.09
CUX2O14529 RAP2CP1-201ENST00000605103 478 ntBASIC40.58■■■■■ 4.09
CUX2O14529 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
CUX2O14529 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
CUX2O14529 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CUX2O14529 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
CUX2O14529 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC40.56■■■■■ 4.08
CUX2O14529 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CUX2O14529 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC40.56■■■■■ 4.08
CUX2O14529 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC40.56■■■■■ 4.08
CUX2O14529 AC104771.1-201ENST00000603335 964 ntBASIC40.56■■■■■ 4.08
CUX2O14529 MPST-208ENST00000628507 698 ntTSL 5 BASIC40.56■■■■■ 4.08
CUX2O14529 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
CUX2O14529 AC027612.3-201ENST00000413684 1047 ntBASIC40.55■■■■■ 4.08
CUX2O14529 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
CUX2O14529 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC40.54■■■■■ 4.08
CUX2O14529 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC40.54■■■■■ 4.08
CUX2O14529 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
CUX2O14529 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC40.54■■■■■ 4.08
CUX2O14529 AL449106.1-201ENST00000608517 1980 ntBASIC40.54■■■■■ 4.08
CUX2O14529 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC40.53■■■■■ 4.08
CUX2O14529 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC40.53■■■■■ 4.08
CUX2O14529 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
CUX2O14529 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
CUX2O14529 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
CUX2O14529 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
CUX2O14529 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC40.53■■■■■ 4.08
CUX2O14529 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC40.53■■■■■ 4.08
CUX2O14529 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
CUX2O14529 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC40.52■■■■■ 4.08
CUX2O14529 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC40.52■■■■■ 4.08
CUX2O14529 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC40.51■■■■■ 4.08
CUX2O14529 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC40.51■■■■■ 4.08
CUX2O14529 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC40.51■■■■■ 4.08
CUX2O14529 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC40.51■■■■■ 4.07
CUX2O14529 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC40.51■■■■■ 4.07
CUX2O14529 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC40.51■■■■■ 4.07
CUX2O14529 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC40.51■■■■■ 4.07
CUX2O14529 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC40.51■■■■■ 4.07
CUX2O14529 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC40.5■■■■■ 4.07
CUX2O14529 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC40.49■■■■■ 4.07
CUX2O14529 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC40.49■■■■■ 4.07
CUX2O14529 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
CUX2O14529 AC123595.1-201ENST00000440769 1046 ntBASIC40.49■■■■■ 4.07
CUX2O14529 GXYLT1P5-201ENST00000614548 1189 ntBASIC40.49■■■■■ 4.07
CUX2O14529 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC40.48■■■■■ 4.07
CUX2O14529 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
CUX2O14529 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC40.48■■■■■ 4.07
CUX2O14529 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC40.48■■■■■ 4.07
CUX2O14529 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC40.48■■■■■ 4.07
CUX2O14529 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC40.47■■■■■ 4.07
CUX2O14529 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC40.47■■■■■ 4.07
CUX2O14529 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
CUX2O14529 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
CUX2O14529 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC40.46■■■■■ 4.07
CUX2O14529 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC40.46■■■■■ 4.07
CUX2O14529 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC40.46■■■■■ 4.07
CUX2O14529 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC40.46■■■■■ 4.07
CUX2O14529 ST7-205ENST00000393446 2114 ntTSL 5 BASIC40.46■■■■■ 4.07
CUX2O14529 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC40.45■■■■■ 4.07
CUX2O14529 GXYLT1P2-201ENST00000433312 1230 ntBASIC40.45■■■■■ 4.07
CUX2O14529 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC40.45■■■■■ 4.07
CUX2O14529 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC40.45■■■■■ 4.07
CUX2O14529 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
CUX2O14529 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC40.45■■■■■ 4.07
CUX2O14529 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
CUX2O14529 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
CUX2O14529 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
CUX2O14529 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
CUX2O14529 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC40.44■■■■■ 4.06
CUX2O14529 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC40.43■■■■■ 4.06
CUX2O14529 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
CUX2O14529 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC40.43■■■■■ 4.06
CUX2O14529 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC40.43■■■■■ 4.06
CUX2O14529 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC40.43■■■■■ 4.06
CUX2O14529 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
CUX2O14529 SSSCA1-AS1-201ENST00000567594 614 ntBASIC40.42■■■■■ 4.06
CUX2O14529 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC40.42■■■■■ 4.06
CUX2O14529 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC40.42■■■■■ 4.06
CUX2O14529 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC40.41■■■■■ 4.06
CUX2O14529 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
CUX2O14529 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC40.41■■■■■ 4.06
CUX2O14529 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
CUX2O14529 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC40.41■■■■■ 4.06
CUX2O14529 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
CUX2O14529 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
CUX2O14529 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC40.4■■■■■ 4.06
CUX2O14529 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC40.39■■■■■ 4.06
CUX2O14529 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC40.39■■■■■ 4.06
CUX2O14529 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC40.39■■■■■ 4.06
CUX2O14529 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC40.39■■■■■ 4.06
CUX2O14529 ST7-202ENST00000323984 2142 ntTSL 5 BASIC40.38■■■■■ 4.05
CUX2O14529 ST7-207ENST00000393449 2127 ntTSL 5 BASIC40.38■■■■■ 4.05
CUX2O14529 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC40.38■■■■■ 4.05
CUX2O14529 AC136469.2-201ENST00000623944 1028 ntBASIC40.38■■■■■ 4.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms