Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDC42BPBQ9Y5S2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 AC007881.3-201ENST00000608897 607 ntBASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 AC010491.1-201ENST00000563101 2797 ntBASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 AC078991.1-201ENST00000437297 610 ntBASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 AC006122.1-201ENST00000493323 440 ntBASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDC42BPBQ9Y5S2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 CICP11-201ENST00000434745 2827 ntBASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 AC026803.1-201ENST00000569130 274 ntBASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPBQ9Y5S2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 RN7SL8P-201ENST00000461771 266 ntBASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 AC135983.4-201ENST00000564116 1262 ntBASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 AC242376.2-201ENST00000619355 883 ntBASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 PCDH8P1-201ENST00000428983 2773 ntBASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPBQ9Y5S2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 AL109837.1-201ENST00000603272 613 ntBASIC22.79■■□□□ 1.24
CDC42BPBQ9Y5S2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms