Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC244157.2-201ENST00000616239 1006 ntBASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 KRT8P19-201ENST00000551916 1455 ntBASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 PCDHB19P-201ENST00000570871 2371 ntBASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 EIF4HP1-201ENST00000453115 687 ntBASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 ECM1P1-201ENST00000604092 1279 ntBASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 AC011477.6-201ENST00000604980 1927 ntBASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA1Q9Y5H4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 ME2P1-201ENST00000426028 1970 ntBASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 AC138649.2-201ENST00000615886 705 ntBASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 RNF216P1-203ENST00000404404 2427 ntBASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA1Q9Y5H4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms