Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 BX539320.1-201ENST00000623759 877 ntBASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 CSF2RBP1-201ENST00000447905 391 ntBASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 AC022137.2-201ENST00000503482 481 ntBASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 AL138799.1-201ENST00000448213 1675 ntBASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
CTDP1Q9Y5B0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AC099336.1-201ENST00000417053 1171 ntBASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 FO681548.1-201ENST00000455617 1132 ntBASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AP005019.2-201ENST00000615104 511 ntBASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.92■□□□□ 0.46
CTDP1Q9Y5B0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CTDP1Q9Y5B0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms