Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 BCRP6-201ENST00000510112 632 ntBASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 BCRP7-201ENST00000511549 544 ntBASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 AC134312.5-201ENST00000568031 1313 ntBASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
CLCF1Q9UBD9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 AC068418.2-201ENST00000577309 3703 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 ANKRD19P-201ENST00000338192 862 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 AC092933.1-201ENST00000393644 945 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 AC106760.1-201ENST00000508690 800 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 AP005482.1-201ENST00000563722 1273 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 MIR6775-201ENST00000617557 69 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 COX11-210ENST00000639671 696 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 AC084364.1-201ENST00000551967 1556 ntBASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.79□□□□□ -0.2
CLCF1Q9UBD9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.78□□□□□ -0.2
CLCF1Q9UBD9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms