Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 AL590440.2-201ENST00000641973 1595 ntBASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 BCAS2P2-201ENST00000425064 674 ntBASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC180Q9P1Z9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 AC009090.5-201ENST00000624886 2285 ntBASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 AC114947.1-202ENST00000514136 344 ntBASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 RN7SL596P-201ENST00000582123 288 ntBASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 BX088702.1-201ENST00000610784 235 ntBASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC180Q9P1Z9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC180Q9P1Z9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC30.64■■■□□ 2.49
CCDC180Q9P1Z9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC30.64■■■□□ 2.49
CCDC180Q9P1Z9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC180Q9P1Z9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CCDC180Q9P1Z9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 SERF2-206ENST00000409291 807 ntTSL 3 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 ALG1L13P-202ENST00000519320 584 ntBASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 AC131206.1-201ENST00000538078 1211 ntBASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 MIR6769A-201ENST00000617340 73 ntBASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC180Q9P1Z9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 SIGLEC18P-201ENST00000602271 909 ntBASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 AC138466.4-201ENST00000623965 852 ntBASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 NAMA-206ENST00000605377 509 ntTSL 5 BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC180Q9P1Z9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 BANF1P3-201ENST00000412556 261 ntBASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC180Q9P1Z9 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms