Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 CR788268.1-201ENST00000603931 1809 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC046185.3-201ENST00000623228 1824 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC074138.1-201ENST00000611182 1303 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 MTCYBP39-201ENST00000437562 491 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NPM1P23-201ENST00000440193 849 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 VDAC1P13-201ENST00000447826 859 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 RFPL4AP1-201ENST00000530883 850 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 EIF1AXP2-201ENST00000555940 413 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 AC004492.1-201ENST00000607036 742 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 AC126544.2-201ENST00000625174 749 ntBASIC18.71■□□□□ 0.59
RNF216Q9NWF9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF216Q9NWF9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF216Q9NWF9 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF216Q9NWF9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 OR4C15-201ENST00000314644 1113 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 FCER1A-202ENST00000368115 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 SNORD116-1-201ENST00000384335 95 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 snosnR66.1-201ENST00000391095 99 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AL589823.1-201ENST00000429577 183 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC092669.1-202ENST00000449673 905 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 CYMP-203ENST00000474680 1263 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC092902.1-201ENST00000486999 259 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC093755.1-201ENST00000512950 1023 ntBASIC18.7■□□□□ 0.58
RNF216Q9NWF9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 B2M-202ENST00000544417 933 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF216Q9NWF9 REXO1L3P-201ENST00000622202 1288 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms