Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.35■□□□□ 0.37
CCSER1Q9C0I3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 SPDYE19P-201ENST00000338590 713 ntBASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 DRD5P1-201ENST00000456605 1438 ntBASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 RRP7BP-205ENST00000566851 833 ntBASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 AC036164.1-201ENST00000570544 333 ntBASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 SAMD11P1-201ENST00000571429 661 ntBASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 AL662799.1-202ENST00000614205 422 ntBASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSER1Q9C0I3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 ACE3P-201ENST00000423435 1973 ntBASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCSER1Q9C0I3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 INGX-202ENST00000489074 768 ntBASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSER1Q9C0I3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms