Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC9.99□□□□□ -0.81
KRTAP3-3Q9BYR6 TMEM207-201ENST00000354905 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
KRTAP3-3Q9BYR6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
KRTAP3-3Q9BYR6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
KRTAP3-3Q9BYR6 WNK1-220ENST00000574564 1401 ntBASIC9.99□□□□□ -0.81
KRTAP3-3Q9BYR6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 GIMD1-202ENST00000638719 1470 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TATDN2P1-201ENST00000443767 2331 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 KRTAP9-4-201ENST00000334109 967 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 OR7E12P-201ENST00000344740 973 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 Y_RNA.307-201ENST00000365022 117 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 Y_RNA.372-201ENST00000365599 102 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CCNG1P1-201ENST00000406783 885 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 VN1R8P-201ENST00000407739 893 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 POU5F1P4-201ENST00000413175 1085 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AL158050.1-201ENST00000416077 457 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AL353193.1-201ENST00000421444 268 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 C12orf71-201ENST00000429849 957 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC018644.1-201ENST00000429934 551 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 COX7BP2-201ENST00000437976 242 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TRIM60P18-201ENST00000441518 828 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 SSXP1-201ENST00000453640 473 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 MTCO3P11-201ENST00000455103 774 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC108039.1-201ENST00000456719 609 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 RPL12P36-201ENST00000470623 478 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC116337.2-201ENST00000477662 156 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CAP2-207ENST00000493172 861 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 OR5M14P-201ENST00000506803 618 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 FLJ42102-203ENST00000508543 460 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC091917.3-201ENST00000509496 600 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC022483.1-201ENST00000514020 567 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AP001330.3-201ENST00000520123 633 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AP005902.1-201ENST00000521358 186 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC079329.1-201ENST00000527288 500 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 SLC25A51P2-201ENST00000535708 889 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 FCF1-203ENST00000553615 954 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CHEK2P2-201ENST00000554701 672 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 SKA2-206ENST00000581068 595 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AL356986.1-201ENST00000604085 341 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC084036.1-201ENST00000609190 508 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AL138478.1-201ENST00000612252 832 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 GRAMD4P4-201ENST00000613563 1115 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AL445264.1-201ENST00000621719 171 ntBASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 AC106801.1-201ENST00000518054 1845 ntTSL 5 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
KRTAP3-3Q9BYR6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms