Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SSBP3Q9BWW4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 FAM86LP-201ENST00000478302 853 ntBASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AC092552.1-201ENST00000547243 906 ntBASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 CTBP2P3-201ENST00000585629 1255 ntBASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
SSBP3Q9BWW4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AL603832.2-201ENST00000566195 2125 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AL512384.1-201ENST00000406683 331 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AC098850.1-201ENST00000419919 790 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AL442647.2-201ENST00000429864 857 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 INE1-201ENST00000456273 945 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 MIR4313-201ENST00000580760 101 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 MIR8072-201ENST00000614241 80 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 AC112504.1-201ENST00000623415 1841 ntBASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP3Q9BWW4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms