Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 TERF1P3-201ENST00000505638 1227 ntBASIC15.82■□□□□ 0.12
RTP4Q96DX8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.82■□□□□ 0.12
RTP4Q96DX8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTP4Q96DX8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MIR661-201ENST00000384842 89 ntBASIC15.81■□□□□ 0.12
RTP4Q96DX8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC114501.2-201ENST00000439631 535 ntBASIC15.81■□□□□ 0.12
RTP4Q96DX8 AL512638.1-201ENST00000457493 794 ntBASIC15.81■□□□□ 0.12
RTP4Q96DX8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC027369.6-201ENST00000525520 931 ntBASIC15.81■□□□□ 0.12
RTP4Q96DX8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC044860.1-202ENST00000559481 777 ntBASIC15.81■□□□□ 0.12
RTP4Q96DX8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.81■□□□□ 0.12
RTP4Q96DX8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RTP4Q96DX8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTP4Q96DX8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 FAM207CP-201ENST00000443486 507 ntBASIC15.8■□□□□ 0.12
RTP4Q96DX8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms