Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AC011474.4-201ENST00000623523 2076 ntBASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 MIR4751-201ENST00000578027 74 ntBASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AL359183.1-201ENST00000623796 2132 ntBASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 CYP4F24P-201ENST00000586049 1580 ntBASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 CICP17-201ENST00000418553 2377 ntBASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CKAP2Q8WWK9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AC136604.1-201ENST00000418535 575 ntBASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AC073648.2-201ENST00000510116 352 ntBASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AC091304.2-201ENST00000564639 760 ntBASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 FOXO1B-201ENST00000504678 1527 ntBASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CKAP2Q8WWK9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.46■□□□□ 0.07
CKAP2Q8WWK9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms