Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AC018665.1-201ENST00000622927 1362 ntBASIC13.9□□□□□ -0.18
RNF138Q8WVD3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF138Q8WVD3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
RNF138Q8WVD3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.9□□□□□ -0.19
RNF138Q8WVD3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.9□□□□□ -0.19
RNF138Q8WVD3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.9□□□□□ -0.19
RNF138Q8WVD3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.9□□□□□ -0.19
RNF138Q8WVD3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ACE3P-201ENST00000423435 1973 ntBASIC13.89□□□□□ -0.19
RNF138Q8WVD3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AL355864.2-201ENST00000447420 863 ntBASIC13.89□□□□□ -0.19
RNF138Q8WVD3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AGAP7P-201ENST00000582299 2062 ntBASIC13.89□□□□□ -0.19
RNF138Q8WVD3 AGAP14-201ENST00000624701 2060 ntBASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF138Q8WVD3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 AC006058.4-201ENST00000624016 1670 ntBASIC13.88□□□□□ -0.19
RNF138Q8WVD3 AC091951.1-201ENST00000512854 2465 ntBASIC13.88□□□□□ -0.19
RNF138Q8WVD3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF138Q8WVD3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms