Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 TOMM22P5-201ENST00000416399 439 ntBASIC14.57□□□□□ -0.08
NUP43Q8NFH3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ZNF890P-202ENST00000530367 1156 ntBASIC14.57□□□□□ -0.08
NUP43Q8NFH3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP43Q8NFH3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 KRT18P43-201ENST00000469825 1281 ntBASIC14.56□□□□□ -0.08
NUP43Q8NFH3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TIMM17BP1-201ENST00000545713 516 ntBASIC14.56□□□□□ -0.08
NUP43Q8NFH3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 CICP11-201ENST00000434745 2827 ntBASIC14.56□□□□□ -0.08
NUP43Q8NFH3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 AL121723.1-201ENST00000445194 1519 ntBASIC14.56□□□□□ -0.08
NUP43Q8NFH3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP43Q8NFH3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms