Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 YBX1P5-201ENST00000509441 847 ntBASIC17.3■□□□□ 0.36
ZNF397Q8NF99 FAM86C2P-203ENST00000528684 1004 ntBASIC17.3■□□□□ 0.36
ZNF397Q8NF99 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 AC018892.3-201ENST00000623986 2499 ntBASIC17.3■□□□□ 0.36
ZNF397Q8NF99 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF397Q8NF99 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AC006504.5-208ENST00000588784 2401 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 MROH4P-201ENST00000431302 1578 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 BX842568.4-201ENST00000421222 227 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AL671277.1-201ENST00000429656 993 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 HTR5BP-201ENST00000430851 1154 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 ALG1L5P-201ENST00000482043 771 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF397Q8NF99 SBF1P1-201ENST00000444527 5631 ntBASIC17.29■□□□□ 0.36
ZNF397Q8NF99 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF397Q8NF99 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms