Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 AL157414.3-201ENST00000624276 1954 ntBASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 AC068587.8-201ENST00000641239 219 ntBASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 AC092850.2-201ENST00000623821 2697 ntBASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP43Q8NDM7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 AC125604.1-201ENST00000496255 707 ntBASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 AC135983.4-201ENST00000564116 1262 ntBASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 CLUHP2-201ENST00000426660 1303 ntBASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 PCDHA1-201ENST00000378133 2726 ntBASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 KRT8P29-201ENST00000420409 1371 ntBASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC23.71■■□□□ 1.39
CFAP43Q8NDM7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 AC234644.1-201ENST00000406065 370 ntBASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 AL160314.3-201ENST00000556041 767 ntBASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC23.7■■□□□ 1.39
CFAP43Q8NDM7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 AC020658.6-201ENST00000623564 1870 ntBASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC23.7■■□□□ 1.38
CFAP43Q8NDM7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 ZBTB45P1-201ENST00000452761 1456 ntBASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CFAP43Q8NDM7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms