Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 MIR326-201ENST00000362220 95 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 MIR648-201ENST00000385046 94 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 FAM197Y7-201ENST00000432892 766 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 GAPDHP40-201ENST00000505218 1006 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 AP005019.2-201ENST00000615104 511 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 AL139099.5-201ENST00000635274 300 ntBASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COLGALT1Q8NBJ5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.71■□□□□ 0.26
COLGALT1Q8NBJ5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
COLGALT1Q8NBJ5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
COLGALT1Q8NBJ5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AC006001.1-201ENST00000325130 474 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AC006033.1-201ENST00000440505 426 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 GOLGA2P4-201ENST00000441462 777 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 KRT18P25-201ENST00000508931 1278 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AC078819.1-201ENST00000547454 765 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AC012085.1-201ENST00000548270 765 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AL118558.3-201ENST00000607414 1079 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COLGALT1Q8NBJ5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 LINC02447-202ENST00000501888 2146 ntBASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.69■□□□□ 0.26
COLGALT1Q8NBJ5 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms