Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC23.93■■□□□ 1.42
VPS8Q8N3P4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 AC006486.2-201ENST00000624246 2199 ntBASIC23.92■■□□□ 1.42
VPS8Q8N3P4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 AC073413.1-201ENST00000603927 732 ntBASIC23.92■■□□□ 1.42
VPS8Q8N3P4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC23.92■■□□□ 1.42
VPS8Q8N3P4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AL391280.1-201ENST00000506969 1062 ntBASIC23.91■■□□□ 1.42
VPS8Q8N3P4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC138466.3-201ENST00000619983 221 ntBASIC23.91■■□□□ 1.42
VPS8Q8N3P4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS8Q8N3P4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 HNRNPA1P48-202ENST00000565308 961 ntBASIC23.9■■□□□ 1.42
VPS8Q8N3P4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS8Q8N3P4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
VPS8Q8N3P4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
VPS8Q8N3P4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
VPS8Q8N3P4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC23.89■■□□□ 1.42
VPS8Q8N3P4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
VPS8Q8N3P4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC23.89■■□□□ 1.42
VPS8Q8N3P4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 FAM86HP-204ENST00000513466 959 ntBASIC23.89■■□□□ 1.41
VPS8Q8N3P4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 AL583810.1-201ENST00000553344 1045 ntBASIC23.89■■□□□ 1.41
VPS8Q8N3P4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC23.89■■□□□ 1.41
VPS8Q8N3P4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms