Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 KRT43P-201ENST00000434019 910 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 BCRP2-202ENST00000447763 634 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 AC093433.1-201ENST00000458048 571 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 BCRP6-201ENST00000510112 632 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 BCRP7-201ENST00000511549 544 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 AP001063.1-201ENST00000568332 529 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 AC009486.1-201ENST00000569860 813 ntBASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCN4BQ8IWT1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 MSTO2P-201ENST00000314835 1709 ntBASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.36■□□□□ 0.21
SCN4BQ8IWT1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AL355864.2-201ENST00000447420 863 ntBASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.35■□□□□ 0.21
SCN4BQ8IWT1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms