Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TPM3P8-201ENST00000330554 643 ntBASIC16.76■□□□□ 0.27
HERC6Q8IVU3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 ACTBP8-201ENST00000403258 1108 ntBASIC16.76■□□□□ 0.27
HERC6Q8IVU3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 IMP3P2-201ENST00000489760 475 ntBASIC16.76■□□□□ 0.27
HERC6Q8IVU3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 RN7SL48P-201ENST00000579283 293 ntBASIC16.76■□□□□ 0.27
HERC6Q8IVU3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.76■□□□□ 0.27
HERC6Q8IVU3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HERC6Q8IVU3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 AC092171.3-201ENST00000610122 2651 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 TMEM198B-204ENST00000484016 896 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 U62317.3-201ENST00000608319 855 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 AC097724.1-201ENST00000609581 426 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 AC091812.3-201ENST00000621362 345 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 AL023775.1-201ENST00000454907 1746 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PCDHA1-201ENST00000378133 2726 ntBASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HERC6Q8IVU3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC091046.1-201ENST00000331871 207 ntBASIC16.74■□□□□ 0.27
HERC6Q8IVU3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 CYP46A4P-201ENST00000414953 267 ntBASIC16.74■□□□□ 0.27
HERC6Q8IVU3 KLF2P2-201ENST00000416807 1039 ntBASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC016700.1-201ENST00000429424 312 ntBASIC16.74■□□□□ 0.27
HERC6Q8IVU3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 CU633904.3-201ENST00000624042 1029 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms