Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS4Q8IUM7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 RPL5P21-201ENST00000404620 815 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 AC016700.1-201ENST00000429424 312 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 HIST2H2BB-201ENST00000449108 381 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 UPF3AP2-201ENST00000457924 1132 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 AP001002.3-201ENST00000623482 206 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 AC006449.5-201ENST00000610658 2098 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 PCDH8P1-201ENST00000428983 2773 ntBASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS4Q8IUM7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AL136309.1-201ENST00000403917 691 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 NKAIN1P1-201ENST00000435754 582 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 CHMP1AP1-201ENST00000445563 662 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AC044849.1-201ENST00000519737 1188 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AC105129.2-201ENST00000559536 390 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AC079328.1-201ENST00000560358 952 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AC015967.2-201ENST00000624092 234 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AC006435.4-201ENST00000625037 234 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AL356737.1-201ENST00000634391 234 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 AL603832.2-201ENST00000566195 2125 ntBASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPAS4Q8IUM7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS4Q8IUM7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPAS4Q8IUM7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AL354877.1-201ENST00000424412 413 ntBASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 FTLP10-202ENST00000505798 471 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms