Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 AL592309.1-201ENST00000443127 649 ntBASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 SLC25A39P2-201ENST00000537614 270 ntBASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 RARRES2P9-201ENST00000565168 469 ntBASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 C20orf181-201ENST00000623918 480 ntBASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 MIR940-201ENST00000401276 94 ntBASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.25□□□□□ -0.13
SMARCD3Q6STE5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC136604.1-201ENST00000418535 575 ntBASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 MKNK2P1-201ENST00000437526 628 ntBASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC069335.1-201ENST00000489972 472 ntBASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AC055717.3-201ENST00000622967 595 ntBASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms