Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFWD3Q6PCD5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AC138969.3-201ENST00000546612 1459 ntBASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AC138932.2-201ENST00000548268 1459 ntBASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AC126755.4-201ENST00000549796 1459 ntBASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 RN7SL399P-201ENST00000471648 279 ntBASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AC023157.3-201ENST00000619086 2088 ntBASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 AC023908.3-201ENST00000564211 3047 ntBASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFWD3Q6PCD5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 NME2P1-201ENST00000426182 414 ntBASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 AC036164.1-201ENST00000570544 333 ntBASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 AL358472.5-202ENST00000641448 1267 ntBASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.22■□□□□ 0.19
RFWD3Q6PCD5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 COX5BP8-201ENST00000416911 349 ntBASIC16.21■□□□□ 0.19
RFWD3Q6PCD5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms