Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 KRT18P25-201ENST00000508931 1278 ntBASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AC132938.4-201ENST00000623835 848 ntBASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC008741.2-201ENST00000612792 3115 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 FAM197Y7-201ENST00000432892 766 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC108725.1-201ENST00000495472 409 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC078819.1-201ENST00000547454 765 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC012085.1-201ENST00000548270 765 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 RN7SL219P-201ENST00000582872 296 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 PRSS30P-206ENST00000641773 873 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 KRT8P35-201ENST00000483942 1338 ntBASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC62Q6P9F0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 AC022188.1-201ENST00000620960 1664 ntBASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 RPL13AP20-201ENST00000459725 609 ntBASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 FAM8A2P-201ENST00000528813 1142 ntBASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 AC010328.2-201ENST00000597698 1111 ntBASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 AC009542.2-202ENST00000619004 1067 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms