Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC078991.1-201ENST00000437297 610 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC011742.3-201ENST00000439053 820 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC079112.1-201ENST00000454972 939 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 SERPINA13P-202ENST00000478994 924 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC124283.3-201ENST00000570869 594 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC092171.5-201ENST00000608012 942 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC007663.3-201ENST00000609632 465 ntBASIC12.97□□□□□ -0.33
RIPPLY3P57055 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 INTS4P2-202ENST00000614726 2019 ntBASIC12.96□□□□□ -0.33
RIPPLY3P57055 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.96□□□□□ -0.33
RIPPLY3P57055 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 ACTBP7-201ENST00000418351 1124 ntBASIC12.96□□□□□ -0.33
RIPPLY3P57055 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 AC044849.1-201ENST00000519737 1188 ntBASIC12.96□□□□□ -0.33
RIPPLY3P57055 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 C2orf69P1-201ENST00000563532 1093 ntBASIC12.96□□□□□ -0.33
RIPPLY3P57055 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RIPPLY3P57055 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RIPPLY3P57055 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RIPPLY3P57055 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RIPPLY3P57055 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
RIPPLY3P57055 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RIPPLY3P57055 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms